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L3_129_030G1_scaffold_364

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_030G1_scaffold_364_1
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..77)
DNA (75bp) protein (25aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WWH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX67998.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
L3_129_030G1_scaffold_364_2
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(148..471)
DNA (324bp) protein (108aa)
Uncharacterized protein n=9 Tax=Clostridiales RepID=B6FQB3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGG87406.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_129_030G1_scaffold_364_3
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(920..1432)
DNA (513bp) protein (171aa)
Putative methionine--tRNA ligase, beta subunit n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTG3_9FIRM
Putative methionine--tRNA ligase, beta subunit {ECO:0000313|EMBL:EDM87118.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
EMAP domain
L3_129_030G1_scaffold_364_4
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1699..2931)
DNA (1233bp) protein (411aa)
Transposon integrase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBX3_9FIRM
Transposon integrase {ECO:0000313|EMBL:EFW04535.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Site-specific recombinase XerD
L3_129_030G1_scaffold_364_5
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2943..3194)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04534.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Excisionase from transposon Tn916.
L3_129_030G1_scaffold_364_6
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3209..3442)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04533.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Excisionase from transposon Tn916.
L3_129_030G1_scaffold_364_7
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3426..3656)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04532.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
DNA binding domain, excisionase family
L3_129_030G1_scaffold_364_8

Not on your lists

comp(3748..4011)
DNA (264bp) protein (88aa)
Excisionase from transposon n=2 Tax=root RepID=K1TKF6_9ZZZZ
Excisionase from transposon {ECO:0000313|EMBL:EKC70238.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Excisionase from transposon Tn916.
L3_129_030G1_scaffold_364_9
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3962..4522)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04531.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Growth inhibitor
L3_129_030G1_scaffold_364_10
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4627..5214)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04530.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Chromatin SPT2
L3_129_030G1_scaffold_364_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5532..5780)
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Clostridium clostridioforme RepID=N9Y642_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ07403.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
DNL zinc finger.
L3_129_030G1_scaffold_364_12
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5777..6502)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04529.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_129_030G1_scaffold_364_13
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6499..6618)
DNA (120bp) protein (40aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=N9WWC5_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27506.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_129_030G1_scaffold_364_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6633..7232)
DNA (600bp) protein (200aa)
LexA repressor {ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.- {ECO:0000256|SAAS:SAAS00273293};; EC=3.4.21.88 {ECO:0000256|SAAS:SAAS00008054};; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
SOS regulatory protein LexA (EC:3.4.21.88)
Repressor LexA n=2 Tax=root RepID=V8CFS4_9FIRM
L3_129_030G1_scaffold_364_15
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7421..8128)
DNA (708bp) protein (236aa)
Predicted transcriptional regulators n=1 Tax=Clostridium sp. CAG:964 RepID=R6U7W8_9CLOT
Predicted transcriptional regulators {ECO:0000313|EMBL:CDC80635.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
Predicted transcriptional regulators
L3_129_030G1_scaffold_364_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8366..9433)
DNA (1068bp) protein (356aa)
Peptide maturation system protein, TIGR04066 family n=2 Tax=Clostridiales RepID=C7GHL3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK92261.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_129_030G1_scaffold_364_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9447..10856)
DNA (1410bp) protein (470aa)
CLI_3235-class bacteriocin maturation radical SAM enzyme n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHL2_9FIRM
CLI_3235-class bacteriocin maturation radical SAM enzyme {ECO:0000313|EMBL:EEU98697.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Arylsulfatase regulator (Fe-S oxidoreductase)
L3_129_030G1_scaffold_364_18
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10943..11125)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9J281_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS25287.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L3_129_030G1_scaffold_364_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11195..11968)
DNA (774bp) protein (258aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=C7GHL0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09876.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_129_030G1_scaffold_364_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12081..12197)
DNA (117bp) protein (39aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSM3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09875.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_129_030G1_scaffold_364_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12544..12807)
DNA (264bp) protein (88aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GHK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98694.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
methyl-accepting chemotaxis protein
L3_129_030G1_scaffold_364_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13957..14730
DNA (774bp) protein (258aa)
Methyltransferase domain n=2 Tax=Clostridiales RepID=D4JMQ5_9FIRM
Methyltransferase domain.
Methyltransferase domain {ECO:0000313|EMBL:CBK92259.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_129_030G1_scaffold_364_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14762..15415
DNA (654bp) protein (218aa)
Methyltransferase domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHK5_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EEU98690.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Methyltransferase domain.
L3_129_030G1_scaffold_364_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15418..15738
DNA (321bp) protein (107aa)
MazG nucleotide pyrophosphohydrolase domain n=3 Tax=Clostridiales RepID=D4JMQ3_9FIRM
MazG nucleotide pyrophosphohydrolase domain.
MazG nucleotide pyrophosphohydrolase domain {ECO:0000313|EMBL:CBL09870.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_129_030G1_scaffold_364_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15735..16253
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=3 Tax=Clostridiales RepID=D4JMQ2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09869.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_129_030G1_scaffold_364_26
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16265..17167
DNA (903bp) protein (301aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=C7GHK2_9FIRM
Domain of unknown function (DUF1848).
Uncharacterized protein {ECO:0000313|EMBL:CBK92255.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_129_030G1_scaffold_364_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17189..18376
DNA (1188bp) protein (396aa)
Major Facilitator Superfamily n=3 Tax=Clostridiales RepID=D4JMQ0_9FIRM
Major Facilitator Superfamily.
Major Facilitator Superfamily {ECO:0000313|EMBL:CBL09867.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_129_030G1_scaffold_364_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18571..19074)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98788.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_129_030G1_scaffold_364_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19144..20223)
DNA (1080bp) protein (360aa)
Site-specific recombinases, DNA invertase Pin homologs n=2 Tax=Clostridiales RepID=D4JMP9_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EEU98787.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_129_030G1_scaffold_364_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20340..21260)
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=C7GHB8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU98786.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Displaying items 1-30 of 46 in total

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