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L3_129_030G1_scaffold_383

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_030G1_scaffold_383_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..82)
DNA (81bp) protein (27aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
YbaK/prolyl-tRNA synthetases associated domain-containing protein n=1 Tax=Clostridium perfringens F262 RepID=H7CW92_CLOPF
prolyl-tRNA synthetase
L3_129_030G1_scaffold_383_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(249..551)
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RB93_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT22483.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_129_030G1_scaffold_383_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(743..1771)
DNA (1029bp) protein (343aa)
Glycosyl hydrolase, family 25 n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RB94_CLOPF
Glycosyl hydrolase, family 25 {ECO:0000313|EMBL:EDT22475.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
glycosyl hydrolase
L3_129_030G1_scaffold_383_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1857..2273)
DNA (417bp) protein (139aa)
Conserved domain protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RB95_CLOPF
Conserved domain protein {ECO:0000313|EMBL:EDT22482.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L3_129_030G1_scaffold_383_5
Clostridium phage vB_CpeS-CP51, Caudovirales, Viruses

Not on your lists

comp(2314..2730)
DNA (417bp) protein (139aa)
Putative holin n=1 Tax=Clostridium phage vB_CpeS-CP51 RepID=M9Q253_9CAUD
Putative holin {ECO:0000313|EMBL:AGH27914.1}; TaxID=1305708 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Clostridium phage vB_CpeS-CP51.;"
toxin secretion/phage lysis holin
L3_129_030G1_scaffold_383_6

Not on your lists

comp(2744..2992)
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TSH3_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87939.1}; TaxID=396359 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA phages.;" source="Clostridium phage phiSM101.;"
L3_129_030G1_scaffold_383_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3011..8839)
DNA (5829bp) protein (1943aa)
Phage minor structural protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPC8_CLOPF
KID repeat-containing protein
KID repeat family protein {ECO:0000313|EMBL:EDT26077.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_129_030G1_scaffold_383_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8866..9237)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPC7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT22502.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L3_129_030G1_scaffold_383_9
Clostridium phage vB_CpeS-CP51, Caudovirales, Viruses

Not on your lists

comp(9304..9570)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPC6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:AGH27911.1}; TaxID=1305708 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Clostridium phage vB_CpeS-CP51.;"
hypothetical protein
L3_129_030G1_scaffold_383_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9586..10281)
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPC5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14118.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
tail component family protein
L3_129_030G1_scaffold_383_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10281..13844)
DNA (3564bp) protein (1188aa)
Phage tail tape measure protein, TP901 family, core region n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPC4_CLOPF
Phage tail tape measure protein, family, core region domain protein {ECO:0000313|EMBL:EDT14072.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
phage tail tape measure protein, family, core region
L3_129_030G1_scaffold_383_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13844..14146)
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPC3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14066.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_129_030G1_scaffold_383_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14128..14469)
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPC2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14101.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_129_030G1_scaffold_383_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14484..15011)
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPC1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14110.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_129_030G1_scaffold_383_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15399..15812)
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPC0_CLOPF
Phage protein, HK97 gp10 family {ECO:0000313|EMBL:EDT14116.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_129_030G1_scaffold_383_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15802..16116)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPB9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14069.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_129_030G1_scaffold_383_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16129..16431)
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPB8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14067.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_129_030G1_scaffold_383_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16476..17297)
DNA (822bp) protein (274aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPB7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14105.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_129_030G1_scaffold_383_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17314..17919)
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPB6_CLOPF
Phage minor structural GP20 {ECO:0000313|EMBL:EDT14099.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
minor structural GP20 protein
L3_129_030G1_scaffold_383_20
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18115..18333
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPB5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA87240.1}; TaxID=644801 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri RCH2.;"
L3_129_030G1_scaffold_383_21
unknown

Not on your lists

18452..18628
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPB4_CLOPF
L3_129_030G1_scaffold_383_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18694..19458)
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPB3_CLOPF
Putative minor head protein {ECO:0000313|EMBL:EDT14084.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
phage minor head protein
L3_129_030G1_scaffold_383_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19448..20887)
DNA (1440bp) protein (480aa)
SPP1 family phage portal protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPB2_CLOPF
Phage portal protein, SPP1 family {ECO:0000313|EMBL:EDT14065.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
phage portal protein, SPP1 family
L3_129_030G1_scaffold_383_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20901..22160)
DNA (1260bp) protein (420aa)
PBSX family phage terminase, large subunit n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPB1_CLOPF
Phage terminase, large subunit, pbsx family {ECO:0000313|EMBL:EDS80608.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
terminase
L3_129_030G1_scaffold_383_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22144..22584)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPB0_CLOPF
phage terminase small subunit
Phage terminase, small subunit {ECO:0000313|EMBL:EDT22489.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_129_030G1_scaffold_383_26
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22700..23275)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X1Z7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09748.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_129_030G1_scaffold_383_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23298..24218)
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Clostridium phage phiCD119 (strain Clostridium difficile/United States/Govind/2006) RepID=Q24LC1_BPPCD
Uncharacterized protein {ECO:0000313|EMBL:CDS82796.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hypothetical protein
L3_129_030G1_scaffold_383_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24737..25210)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BLY4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS79195.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_129_030G1_scaffold_383_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25228..25554)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BLY1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS79222.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_129_030G1_scaffold_383_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25529..25732)
DNA (204bp) protein (68aa)
C4-dicarboxylate transport system substrate-binding protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BLY0_CLOPF
C4-dicarboxylate transport system substrate-binding protein {ECO:0000313|EMBL:EDS79212.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Displaying items 1-30 of 55 in total

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