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L3_129_030G1_scaffold_392

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_030G1_scaffold_392_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1932..2813)
DNA (882bp) protein (294aa)
LD-carboxypeptidase family protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R9Y1_CLOPF
LD-carboxypeptidase family protein {ECO:0000313|EMBL:EDT22934.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
LD-carboxypeptidase
L3_129_030G1_scaffold_392_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2905..3849)
DNA (945bp) protein (315aa)
Probable transport protein n=9 Tax=Clostridium perfringens RepID=Q8XHM6_CLOPE
cation transporter
Putative cation transporter {ECO:0000313|EMBL:EIA15970.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_129_030G1_scaffold_392_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4124..4621
DNA (498bp) protein (166aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CZG1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14450.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_129_030G1_scaffold_392_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4650..5819)
DNA (1170bp) protein (390aa)
Amidohydrolase homolog n=2 Tax=Clostridium perfringens RepID=B1BV53_CLOPF
Amidohydrolase homolog {ECO:0000313|EMBL:EDT22943.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
amidohydrolase
L3_129_030G1_scaffold_392_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5975..6151
DNA (177bp) protein (59aa)
Probable sigma-F transcribed protein n=10 Tax=Clostridium perfringens RepID=Q8XHM9_CLOPE
putative csfB protein
Putative csfB protein {ECO:0000313|EMBL:EDT26017.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_129_030G1_scaffold_392_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6169..7599
DNA (1431bp) protein (477aa)
Orn/Lys/Arg decarboxylase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V4N6_CLOPF
Orn/Lys/Arg decarboxylase {ECO:0000313|EMBL:EDT71204.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Orn/Lys/Arg decarboxylase
L3_129_030G1_scaffold_392_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7845..8435
DNA (591bp) protein (197aa)
Guanylate kinase, homolog n=2 Tax=Clostridium perfringens RepID=Q0TMK0_CLOP1
guanylate kinase
Guanylate kinase, homolog {ECO:0000313|EMBL:EDT22948.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_129_030G1_scaffold_392_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8452..8607
DNA (156bp) protein (52aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CZF6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26018.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_129_030G1_scaffold_392_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8764..9093
DNA (330bp) protein (110aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CZF5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82156.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_129_030G1_scaffold_392_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9115..10038
DNA (924bp) protein (308aa)
DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III subunit delta {ECO:0000313|EMBL:EIA15962.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EIA15962.1};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Putative DNA polymerase III, delta prime subunit n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TMK3_CLOP1
L3_129_030G1_scaffold_392_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10041..10946
DNA (906bp) protein (302aa)
PSP1 domain-containing protein n=10 Tax=Clostridium perfringens RepID=H7CZF3_CLOPF
PSP1 domain-containing protein
Signal peptidase-like protein {ECO:0000313|EMBL:BAB82154.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_129_030G1_scaffold_392_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11115..11285
DNA (171bp) protein (57aa)
Ferredoxin n=11 Tax=Clostridium perfringens RepID=FER_CLOPE
ferredoxin (fdxA)
Putative ferredoxin {ECO:0000313|EMBL:ABG86239.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_129_030G1_scaffold_392_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11402..13084
DNA (1683bp) protein (561aa)
Mur ligase family protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R9Z3_CLOPF
Mur ligase family protein {ECO:0000313|EMBL:EDT22961.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Mur ligase
L3_129_030G1_scaffold_392_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13135..13788)
DNA (654bp) protein (218aa)
Putative zinc-dependent hydrolase n=1 Tax=Clostridium perfringens F262 RepID=H7CZF0_CLOPF
Putative zinc-dependent hydrolase {ECO:0000313|EMBL:EIA15958.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
zinc-dependent hydrolase
L3_129_030G1_scaffold_392_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14005..14460
DNA (456bp) protein (152aa)
Transcriptional regulator CtsR n=10 Tax=Clostridium perfringens RepID=H7CZE9_CLOPF
transcriptional repressor
Transcriptional repressor of class III stress genes {ECO:0000313|EMBL:BAB82150.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_129_030G1_scaffold_392_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14480..15007
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CZE8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA15956.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_129_030G1_scaffold_392_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14991..16004
DNA (1014bp) protein (338aa)
Protein-arginine kinase {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166216}; EC=2.7.14.1 {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166206};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Putative ATP:guanido phosphotransferase HMPREF9476_02490 n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CVB9_CLOPF
ATP:guanido phosphotransferase
L3_129_030G1_scaffold_392_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16029..18479
DNA (2451bp) protein (817aa)
Negative regulator of genetic competence MecB/ClpC {ECO:0000313|EMBL:EDT22945.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDT22945.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
clpC; negative regulator of genetic competence MecB/ClpC (EC:3.4.21.-)
Negative regulator of genetic competence MecB/ClpC n=2 Tax=Clostridium perfringens RepID=Q0TML1_CLOP1
L3_129_030G1_scaffold_392_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18750..19688
DNA (939bp) protein (313aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Thioredoxin reductase n=10 Tax=Clostridium perfringens RepID=H7CZE5_CLOPF
thioredoxin-disulfide reductase
L3_129_030G1_scaffold_392_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19691..19924
DNA (234bp) protein (78aa)
YruB family glutaredoxin-like protein n=11 Tax=Clostridium perfringens RepID=H7CZE4_CLOPF
YruB family glutaredoxin-like protein
Glutaredoxin-like protein, YruB-family {ECO:0000313|EMBL:EDT26005.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_129_030G1_scaffold_392_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19941..21389
DNA (1449bp) protein (483aa)
gapN; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.9)
Glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent {ECO:0000313|EMBL:EDT22969.1}; EC=1.2.1.9 {ECO:0000313|EMBL:EDT22969.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent n=3 Tax=Clostridium perfringens RepID=Q0TML4_CLOP1
L3_129_030G1_scaffold_392_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21511..21738)
DNA (228bp) protein (76aa)
YruB family glutaredoxin-like protein n=10 Tax=Clostridium perfringens RepID=H7CZE2_CLOPF
glutaredoxin
Glutaredoxin-like protein, YruB-family {ECO:0000313|EMBL:EDT14437.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_129_030G1_scaffold_392_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21832..21996)
DNA (165bp) protein (55aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CZE1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA15949.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_129_030G1_scaffold_392_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22196..22924
DNA (729bp) protein (243aa)
GntR family transcriptional regulator n=4 Tax=Clostridium perfringens RepID=H7CZE0_CLOPF
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDT25996.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_129_030G1_scaffold_392_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22915..23643
DNA (729bp) protein (243aa)
nagB; glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase {ECO:0000255|HAMAP-Rule:MF_01241}; EC=3.5.99.6 {ECO:0000255|HAMAP-Rule:MF_01241};; GlcN6P deaminase {ECO:0000255|HAMAP-Rule:MF_01241}; Short=GNPDA {ECO:0000255|HAMAP-Rule:MF_01241};; Glucosamine-6-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_01241}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
Glucosamine-6-phosphate deaminase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=NAGB_CLOP1
L3_129_030G1_scaffold_392_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23870..25255
DNA (1386bp) protein (462aa)
DNA repair protein radA n=3 Tax=Clostridium perfringens RepID=B1BV32_CLOPF
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
radA; DNA repair protein RadA
L3_129_030G1_scaffold_392_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25275..26339
DNA (1065bp) protein (355aa)
DNA integrity scanning protein DisA n=9 Tax=Clostridium perfringens RepID=DISA_CLOPE
DNA integrity scanning protein DisA
DNA integrity scanning protein DisA {ECO:0000256|HAMAP-Rule:MF_01438, ECO:0000256|SAAS:SAAS00010389}; Cyclic di-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01438}; Diadenylate cyclase {ECO:0000256|HAMAP-Rule:MF_01438, ECO:0000256|SAAS:SAAS00207481}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_129_030G1_scaffold_392_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26373..26774)
DNA (402bp) protein (134aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=Q8XHQ1_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82137.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_129_030G1_scaffold_392_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27041..28192
DNA (1152bp) protein (384aa)
PIN/TRAM domain protein n=4 Tax=Clostridium perfringens RepID=H7CZD5_CLOPF
PIN/TRAM domain-containing protein
PIN/TRAM domain protein {ECO:0000313|EMBL:EIA15943.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_129_030G1_scaffold_392_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28206..28883
DNA (678bp) protein (226aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=8 Tax=Clostridium perfringens RepID=ISPD_CLOP1
Displaying items 1-30 of 38 in total

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