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L3_129_030G1_scaffold_430

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_030G1_scaffold_430_1
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(116..2074)
DNA (1959bp) protein (653aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJR2_9CLOT
hypothetical protein
L3_129_030G1_scaffold_430_2
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2175..3011)
DNA (837bp) protein (279aa)
PHP domain protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FPL8_9CLOT
PHP domain protein {ECO:0000313|EMBL:CDB15168.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
hypothetical protein
L3_129_030G1_scaffold_430_3
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3265..4128
DNA (864bp) protein (288aa)
fba; fructose-1,6-bisphosphate aldolase, class II (EC:4.1.2.13)
Fructose-1 6-bisphosphate aldolase class II n=1 Tax=Clostridium sp. CAG:265 RepID=R6L1C4_9CLOT
Fructose-1 6-bisphosphate aldolase class II {ECO:0000313|EMBL:CDB75946.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
L3_129_030G1_scaffold_430_4
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4171..4989)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28190.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_129_030G1_scaffold_430_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5628..6506)
DNA (879bp) protein (293aa)
sdaAA; L-serine dehydratase, iron-sulfur-dependent, alpha subunit (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJR7_9CLOT
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EKY28191.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_129_030G1_scaffold_430_6
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6508..7185)
DNA (678bp) protein (226aa)
sdaAB; L-serine dehydratase, iron-sulfur-dependent, beta subunit (EC:4.3.1.17)
Probable L-serine dehydratase beta subunit n=1 Tax=Clostridium sp. CAG:265 RepID=R6KXM2_9CLOT
Probable L-serine dehydratase beta subunit {ECO:0000313|EMBL:CDB75939.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
L3_129_030G1_scaffold_430_7
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7358..8854)
DNA (1497bp) protein (499aa)
Phosphoribulokinase/uridine kinase family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJK5_9CLOT
Phosphoribulokinase/uridine kinase family protein {ECO:0000313|EMBL:EKY28194.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
phosphoribulokinase / Uridine kinase family protein
L3_129_030G1_scaffold_430_8
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9171..10112
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6LP98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB75937.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
hypothetical protein
L3_129_030G1_scaffold_430_9
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10076..10456
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJS2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28196.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_129_030G1_scaffold_430_10
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10798..12021
DNA (1224bp) protein (408aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
argG; argininosuccinate synthase ArgG (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKU9_9CLOT
L3_129_030G1_scaffold_430_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12023..13423
DNA (1401bp) protein (467aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
argH; argininosuccinate lyase ArgH (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJP3_9CLOT
L3_129_030G1_scaffold_430_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13411..14445
DNA (1035bp) protein (345aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
argC; N-acetyl-gamma-glutamyl-phosphate reductase ArgC (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJL0_9CLOT
L3_129_030G1_scaffold_430_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14465..15694
DNA (1230bp) protein (410aa)
argJ; argJ1: arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.35 2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKG8_9CLOT
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_129_030G1_scaffold_430_14
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15802..16656
DNA (855bp) protein (285aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
argB; acetylglutamate kinase ArgB (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJS8_9CLOT
L3_129_030G1_scaffold_430_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16673..17842
DNA (1170bp) protein (390aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
argD; acetylornithine aminotransferase ArgD (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKV4_9CLOT
L3_129_030G1_scaffold_430_16
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17955..18875
DNA (921bp) protein (307aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
argF; ornithine carbamoyltransferase ArgF (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJP8_9CLOT
L3_129_030G1_scaffold_430_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18902..19942)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKH8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28210.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_129_030G1_scaffold_430_18
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20011..20910)
DNA (900bp) protein (300aa)
LysR substrate binding domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJT6_9CLOT
LysR substrate binding domain protein {ECO:0000313|EMBL:EKY28211.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
HTH-type transcriptional regulator gltC
L3_129_030G1_scaffold_430_19
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21145..22374
DNA (1230bp) protein (410aa)
Transporter, major facilitator family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKW4_9CLOT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EKY28212.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ydiM1; inner membrane transport protein YdiM
L3_129_030G1_scaffold_430_20
unknown

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22585..22833
DNA (249bp) protein (83aa)

This feature has no annotations

L3_129_030G1_scaffold_430_21
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22996..23520)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFT8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY26462.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_129_030G1_scaffold_430_22
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23687..24961)
DNA (1275bp) protein (425aa)
Transporter, major facilitator family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEU9_9CLOT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EKY26461.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
major facilitator superfamily transporter
L3_129_030G1_scaffold_430_23
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24951..25751)
DNA (801bp) protein (267aa)
fhuC; Iron(3+)-hydroxamate import ATP-binding protein FhuC (EC:3.6.3.34)
Putative ferrichrome ABC transporter, ATP-binding protein FhuC n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFK1_9CLOT
Putative ferrichrome ABC transporter, ATP-binding protein FhuC {ECO:0000313|EMBL:EKY26460.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_129_030G1_scaffold_430_24
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25754..26761)
DNA (1008bp) protein (336aa)
Putative ferrichrome transport system permease protein FhuG n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEN7_9CLOT
Putative ferrichrome transport system permease protein FhuG {ECO:0000313|EMBL:EKY26459.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
transport system permease
L3_129_030G1_scaffold_430_25
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26761..27753)
DNA (993bp) protein (331aa)
Putative iron(3+)-hydroxamate import system permease protein FhuB n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEQ4_9CLOT
Putative iron(3+)-hydroxamate import system permease protein FhuB {ECO:0000313|EMBL:EKY26458.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
putative membrane protein
L3_129_030G1_scaffold_430_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27740..28690)
DNA (951bp) protein (317aa)
Periplasmic binding protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFT4_9CLOT
Periplasmic binding protein {ECO:0000313|EMBL:EKY26457.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
putative secreted protein
L3_129_030G1_scaffold_430_27
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28966..29970
DNA (1005bp) protein (335aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEU3_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EKY26456.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_129_030G1_scaffold_430_28
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30004..30543)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI000370C467
NADPH-dependent FMN reductase {ECO:0000313|EMBL:KJU72879.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NADPH-dependent FMN reductase
Displaying 28 items

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