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L3_129_030G1_scaffold_443

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_030G1_scaffold_443_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(164..784)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGU2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98327.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_129_030G1_scaffold_443_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(862..1308)
DNA (447bp) protein (149aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLN2_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EKY28894.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
acetyltransferase
L3_129_030G1_scaffold_443_3
Enterococcus pallens, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1332..2210)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Enterococcus pallens ATCC BAA-351 RepID=R2PRX2_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOH87312.1}; TaxID=1158607 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus pallens ATCC BAA-351.;"
hypothetical protein
L3_129_030G1_scaffold_443_4
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2360..2551)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FNX7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG02414.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
L3_129_030G1_scaffold_443_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2671..3537)
DNA (867bp) protein (289aa)
Nitroreductase family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QMH4_9CLOT
Nitroreductase family protein {ECO:0000313|EMBL:EKY28900.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
nitroreductase
L3_129_030G1_scaffold_443_6
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3764..4579)
DNA (816bp) protein (272aa)
ABC transporter, permease family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLU5_9CLOT
ABC transporter, permease family protein {ECO:0000313|EMBL:EKY28901.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ABC transporter permease
L3_129_030G1_scaffold_443_7
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4581..5468)
DNA (888bp) protein (296aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QMW2_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EKY28902.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ABC transporter
L3_129_030G1_scaffold_443_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5541..6332)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLR0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28903.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_129_030G1_scaffold_443_9
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6506..7375
DNA (870bp) protein (290aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
map; methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLP0_9CLOT
L3_129_030G1_scaffold_443_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7637..9250
DNA (1614bp) protein (538aa)
asD: bifunctional aspartate aminotransferase and L-aspartate beta-decarboxylase (EC:2.6.1.1 4.1.1.12)
Aspartate 4-decarboxylase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4L5_9CLOT
Aspartate 4-decarboxylase {ECO:0000313|EMBL:EEH98777.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_129_030G1_scaffold_443_11
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9349..10164)
DNA (816bp) protein (272aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=7 Tax=Clostridium thermocellum RepID=A3DHT2_CLOTH
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ABN53511.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_129_030G1_scaffold_443_12
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10246..10710)
DNA (465bp) protein (155aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
def2; peptide deformylase 2 (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T418_9CLOT
L3_129_030G1_scaffold_443_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10774..11589
DNA (816bp) protein (272aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
NAD-dependent deacetylase (EC:3.6.1.-)
NAD-dependent protein deacetylase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLV4_9CLOT
L3_129_030G1_scaffold_443_14
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11651..12118)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLR9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28913.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
albumin-binding protein-like protein
L3_129_030G1_scaffold_443_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12236..13306)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLQ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28914.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_129_030G1_scaffold_443_16
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13528..15105)
DNA (1578bp) protein (526aa)
MutS domain V protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QMI7_9CLOT
MutS domain V protein {ECO:0000313|EMBL:EKY28915.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
MutS domain-containing protein
L3_129_030G1_scaffold_443_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15282..15506)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QMX4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28917.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_129_030G1_scaffold_443_18
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15702..17477
DNA (1776bp) protein (592aa)
Arylsulfatase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLS3_9CLOT
Arylsulfatase {ECO:0000313|EMBL:EKY28918.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L3_129_030G1_scaffold_443_19
Bacillus hemicellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17562..18500)
DNA (939bp) protein (313aa)
alpha-N-arabinofuranosidase n=1 Tax=Paenibacillus ginsengihumi RepID=UPI0003810A7D
Alpha-L-arabinofuranosidase II {ECO:0000313|EMBL:GAE32275.1}; TaxID=1236971 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus hemicellulosilyticus JCM 9152.;"
alpha-N-arabinofuranosidase
L3_129_030G1_scaffold_443_20
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(18530..19468)
DNA (939bp) protein (313aa)
Transcriptional regulator, ArsR family n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RY62_SPHGB
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADY12561.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
L3_129_030G1_scaffold_443_21
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19763..20656)
DNA (894bp) protein (298aa)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:AJG99741.1}; EC=3.6.3.17 {ECO:0000313|EMBL:AJG99741.1};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
Lactose/L-arabinose transport system permease n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LG21_9BACL
monosaccharide-transporting ATPase
L3_129_030G1_scaffold_443_22
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20660..21553)
DNA (894bp) protein (298aa)
Arabinose transporter permease n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FSJ4_CLOPA
binding-protein-dependent transport system inner membrane protein
Arabinose transporter permease {ECO:0000313|EMBL:ETD67115.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L3_129_030G1_scaffold_443_23
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21627..23033)
DNA (1407bp) protein (469aa)
ABC transporter substrate-binding protein n=1 Tax=Saccharibacillus kuerlensis RepID=UPI000380C473
extracellular solute-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETD67116.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L3_129_030G1_scaffold_443_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23355..25313)
DNA (1959bp) protein (653aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L364_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL14054.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_129_030G1_scaffold_443_25
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25560..26594)
DNA (1035bp) protein (345aa)
LacI family transcriptional regulator (EC:5.1.1.1)
Transcriptional regulator, LacI family n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BCP1_9FIRM
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EDM64208.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L3_129_030G1_scaffold_443_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26746..27588)
DNA (843bp) protein (281aa)
Nucleotide-binding family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLW2_9CLOT
Nucleotide-binding family protein {ECO:0000313|EMBL:EKY28921.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Mrp protein
L3_129_030G1_scaffold_443_27
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27694..28023)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLW7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28926.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_129_030G1_scaffold_443_28
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28228..29496
DNA (1269bp) protein (423aa)
diguanylate cyclase/phosphodiesterase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E30178
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EGL20229.1}; TaxID=944559 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF7.;"
Displaying 28 items

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