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L3_129_030G1_scaffold_446

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_030G1_scaffold_446_1
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(173..1558)
DNA (1386bp) protein (462aa)
Amino acid permease n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BE31_9ENTR
Putative APC family transporter YifK {ECO:0000313|EMBL:GAL60086.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
D-alanine/D-serine/glycine permease
L3_129_030G1_scaffold_446_2
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1798..2538)
DNA (741bp) protein (247aa)
UDP-N-acetyl-D-mannosaminuronic acid transferase {ECO:0000256|HAMAP-Rule:MF_01001, ECO:0000256|SAAS:SAAS00014171}; Short=UDP-ManNAcA transferase {ECO:0000256|HAMAP-Rule:MF_01001};; EC=2.4.1.180 {ECO:0000256|HAMAP-Rule:MF_01001, ECO:0000256|SAAS:SAAS00014176};; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
UDP-N-acetyl-D-mannosaminuronic acid transferase n=1 Tax=Yokenella regensburgei ATCC 43003 RepID=G9YXZ7_9ENTR
exopolysaccharide biosynthesis protein, WecB/TagA/CpsF family
L3_129_030G1_scaffold_446_3
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2552..3904)
DNA (1353bp) protein (451aa)
polymerase n=1 Tax=Enterobacter cloacae RepID=UPI000318501C
Probable ECA polymerase {ECO:0000256|HAMAP-Rule:MF_01003, ECO:0000256|SAAS:SAAS00275810}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
common antigen polymerase
L3_129_030G1_scaffold_446_4
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3901..4980)
DNA (1080bp) protein (360aa)
TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase {ECO:0000256|HAMAP-Rule:MF_01002, ECO:0000256|SAAS:SAAS00151893}; EC=2.4.1.325 {ECO:0000256|HAMAP-Rule:MF_01002, ECO:0000256|SAAS:SAAS00151892};; 4-alpha-L-fucosyltransferase {ECO:0000256|HAMAP-Rule:MF_01002}; TDP-Fuc4NAc:lipid II Fuc4NAc transferase {ECO:0000256|HAMAP-Rule:MF_01002}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
4-alpha-L-fucosyltransferase n=3 Tax=Salmonella enterica I RepID=V2GJQ8_SALET
4-alpha-L-fucosyltransferase
L3_129_030G1_scaffold_446_5
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4977..6227)
DNA (1251bp) protein (417aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0MC01_ENTBF
O-antigen transporter WzxE {ECO:0000313|EMBL:GAL60090.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
membrane protein involved in the export of O-antigen and teichoic acid
L3_129_030G1_scaffold_446_6
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6229..7359)
DNA (1131bp) protein (377aa)
TDP-4-oxo-6-deoxy-D-glucose aminotransferase n=1 Tax=Enterobacter cloacae RepID=UPI0002F6178D
Lipopolysaccharide biosynthesis protein RffA {ECO:0000313|EMBL:GAL60091.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
TDP-4-oxo-6-deoxy-D-glucose aminotransferase
L3_129_030G1_scaffold_446_7
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7364..8041)
DNA (678bp) protein (226aa)
TDP-fucosamine acetyltransferase n=1 Tax=Klebsiella oxytoca M5al RepID=K6KTB1_KLEOX
Lipopolysaccharide biosynthesis protein RffC {ECO:0000313|EMBL:GAL60092.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
rffC; dTDP-fucosamine acetyltransferase
L3_129_030G1_scaffold_446_8
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8051..9313)
DNA (1263bp) protein (421aa)
Nucleotide sugar dehydrogenase n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=D2ZMB5_9ENTR
UDP-N-acetyl-D-mannosamine dehydrogenase {ECO:0000313|EMBL:GAL60093.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
wecC; UDP-N-acetyl-D-mannosamine dehydrogenase
L3_129_030G1_scaffold_446_9
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9310..10440)
DNA (1131bp) protein (377aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Enterobacter cloacae S611 RepID=V5B2Z3_ENTCL
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:GAL60094.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
UDP-N-acetylglucosamine 2-epimerase
L3_129_030G1_scaffold_446_10
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10497..11543)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ACT7_CITK8
Lipopolysaccharide biosynthesis protein WzzE {ECO:0000313|EMBL:GAL60095.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
lipopolysaccharide biosynthesis protein WzzE
L3_129_030G1_scaffold_446_11
Enterobacter sp. 638, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11557..12738)
DNA (1182bp) protein (394aa)
Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase n=1 Tax=Enterobacter sp. (strain 638) RepID=A4WG27_ENT38
undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase
Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase {ECO:0000313|EMBL:ABP62657.1}; TaxID=399742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. (strain 638).;"
L3_129_030G1_scaffold_446_12
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12905..14164)
DNA (1260bp) protein (420aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
Transcription termination factor Rho n=17 Tax=Enterobacteriaceae RepID=G2S5J2_ENTAL
rho; transcription termination factor Rho
L3_129_030G1_scaffold_446_13
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14519..14848)
DNA (330bp) protein (110aa)
Thioredoxin n=21 Tax=Enterobacteriaceae RepID=G8LKX5_ENTCL
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
thioredoxin
L3_129_030G1_scaffold_446_14
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14984..16255
DNA (1272bp) protein (424aa)
ATP-dependent RNA helicase RhlB {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011806}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011808};; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
ATP-dependent RNA helicase RhlB n=1 Tax=Enterobacter cloacae S611 RepID=V5AYH8_ENTCL
ATP-dependent RNA helicase RhlB
L3_129_030G1_scaffold_446_15
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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16262..17746
DNA (1485bp) protein (495aa)
Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01550, ECO:0000256|SAAS:SAAS00181013}; EC=3.6.1.40 {ECO:0000256|HAMAP-Rule:MF_01550, ECO:0000256|SAAS:SAAS00181014};; Guanosine pentaphosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_01550}; pppGpp-5'-phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_01550}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
Ppx/GppA phosphatase (EC:3.6.1.40)
Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase n=1 Tax=Enterobacter lignolyticus (strain SCF1) RepID=E3G400_ENTLS
L3_129_030G1_scaffold_446_16
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17796..19817)
DNA (2022bp) protein (674aa)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920};; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
ATP-dependent DNA helicase Rep n=2 Tax=Enterobacter cloacae RepID=D5CFW5_ENTCC
ATP-dependent DNA helicase Rep
L3_129_030G1_scaffold_446_17
Cedecea davisae, Cedecea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19829..20182
DNA (354bp) protein (118aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00015172}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00015172};; TaxID=566551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cedecea.;" source="Cedecea davisae DSM 4568.;"
ppiC; peptidyl-prolyl cis-trans isomerase C (EC:5.2.1.8)
Putative peptidyl-prolyl cis-trans isomerase n=1 Tax=Yokenella regensburgei ATCC 43003 RepID=G9YY12_9ENTR
L3_129_030G1_scaffold_446_18
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20241..21716)
DNA (1476bp) protein (492aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00185580}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
Ketol-acid reductoisomerase n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=D2ZMA3_9ENTR
ketol-acid reductoisomerase
L3_129_030G1_scaffold_446_19
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21869..22759
DNA (891bp) protein (297aa)
HTH-type transcriptional activator IlvY n=1 Tax=Enterobacter hormaechei ATCC 49162 RepID=F5RR28_9ENTR
LysR family transcriptional regulator IlvY {ECO:0000313|EMBL:GAL60104.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
DNA-binding transcriptional dual regulator
L3_129_030G1_scaffold_446_20
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22756..24300)
DNA (1545bp) protein (515aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
Threonine dehydratase n=1 Tax=Enterobacter cloacae EC_38VIM1 RepID=S9YYV7_ENTCL
ilvA; threonine dehydratase biosynthetic
L3_129_030G1_scaffold_446_21
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24303..26153)
DNA (1851bp) protein (617aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=2 Tax=Enterobacteriaceae RepID=M9W5H1_RAOOR
L3_129_030G1_scaffold_446_22
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26212..27141)
DNA (930bp) protein (310aa)
Branched-chain-amino-acid transaminase n=1 Tax=Yokenella regensburgei ATCC 43003 RepID=G9YY18_9ENTR
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:GAL60108.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
branched-chain amino acid aminotransferase, group I
L3_129_030G1_scaffold_446_23
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27159..27422)
DNA (264bp) protein (88aa)
ilvM; acetolactate synthase 2 regulatory subunit (EC:2.2.1.6)
Putative acetolactate synthase isozyme 2 small subunit n=1 Tax=Yokenella regensburgei ATCC 43003 RepID=G9YY19_9ENTR
Acetolactate synthase II small subunit {ECO:0000313|EMBL:GAL60109.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
L3_129_030G1_scaffold_446_24
Enterobacter lignolyticus, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27419..29065)
DNA (1647bp) protein (549aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=701347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter lignolyticus (strain SCF1).;"
Acetolactate synthase n=1 Tax=Enterobacter lignolyticus (strain SCF1) RepID=E3G420_ENTLS
acetolactate synthase large subunit
Displaying 24 items

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