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L3_129_030G1_scaffold_673

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_030G1_scaffold_673_1
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(105..893)
DNA (789bp) protein (263aa)
MviM protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UZ62_CLOPF
Putative dehydrogenase {ECO:0000313|EMBL:EKQ51740.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
oxidoreductase domain-containing protein
L3_129_030G1_scaffold_673_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(983..1681)
DNA (699bp) protein (233aa)
Mg2+ transporter-C family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLP6_9CLOT
Mg2+ transporter-C family protein {ECO:0000313|EMBL:EKY28888.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
MgtC/SapB transporter
L3_129_030G1_scaffold_673_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1913..2788
DNA (876bp) protein (292aa)
LD-carboxypeptidase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLM8_9CLOT
LD-carboxypeptidase {ECO:0000313|EMBL:EKY28889.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
LD-carboxypeptidase family protein
L3_129_030G1_scaffold_673_4
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2835..2999
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G1N8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB15246.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
hypothetical protein
L3_129_030G1_scaffold_673_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3189..3563
DNA (375bp) protein (125aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QMG6_9CLOT
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EKY28890.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
GntR-family transcriptional regulator
L3_129_030G1_scaffold_673_6
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3566..4417
DNA (852bp) protein (284aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLT7_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EKY28891.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ABC transporter ATP-binding protein
L3_129_030G1_scaffold_673_7
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4421..5056
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QMV2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28892.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_129_030G1_scaffold_673_8
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5166..6713)
DNA (1548bp) protein (516aa)
Response regulator receiver protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LMQ6_9CLOT
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AGF54090.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_129_030G1_scaffold_673_9
unknown

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comp(6707..6835)
DNA (129bp) protein (43aa)

This feature has no annotations

L3_129_030G1_scaffold_673_10
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6825..7292)
DNA (468bp) protein (156aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Sensor histidine kinase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M804_9CLOT
sensor histidine kinase
L3_129_030G1_scaffold_673_11
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7582..8136)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXB2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ94088.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
glycoside hydrolase
L3_129_030G1_scaffold_673_12
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8236..8760)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXB2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92133.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
alpha-amylase
L3_129_030G1_scaffold_673_13
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9044..9772)
DNA (729bp) protein (243aa)
Methyltransferase domain protein n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6RU03_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:CDC37927.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
type 11 methyltransferase
L3_129_030G1_scaffold_673_14
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10303..11676)
DNA (1374bp) protein (458aa)
Virulence-associated protein E n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QHM6_9FIRM
Virulence-associated protein E {ECO:0000313|EMBL:ERK40813.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Predicted P-loop ATPase and inactivated derivatives
L3_129_030G1_scaffold_673_15
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11645..12298)
DNA (654bp) protein (218aa)
CHC2 zinc finger domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PAT8_9FIRM
CHC2 zinc finger domain protein {ECO:0000313|EMBL:ERK40814.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
DNA primase (bacterial type)
L3_129_030G1_scaffold_673_16
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12428..13450)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2P9K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK40816.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_129_030G1_scaffold_673_17
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13478..13777)
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WW79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX68353.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_129_030G1_scaffold_673_18
unknown

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13936..14313
DNA (378bp) protein (126aa)

This feature has no annotations

Displaying 18 items

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