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L3_129_030G1_scaffold_683

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_030G1_scaffold_683_1
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..97
DNA (96bp) protein (32aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QH84_9CLOT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA {ECO:0000313|EMBL:EKY27055.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_129_030G1_scaffold_683_2
unknown

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625..774
DNA (150bp) protein (50aa)

This feature has no annotations

L3_129_030G1_scaffold_683_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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850..1788
DNA (939bp) protein (313aa)
scrK; fructokinase (EC:2.7.1.4)
Fructokinase {ECO:0000313|EMBL:EDT16390.1}; EC=2.7.1.4 {ECO:0000313|EMBL:EDT16390.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Fructokinase n=2 Tax=Clostridium perfringens RepID=Q0TT54_CLOP1
L3_129_030G1_scaffold_683_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2333..2527
DNA (195bp) protein (65aa)
Putative substrate-binding protein MsmE n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K535_9FIRM
bacterial extracellular solute-binding family protein
Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:AIY84884.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_129_030G1_scaffold_683_5
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2588..2806
DNA (219bp) protein (73aa)
ABC transporter solute-binding protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X5V6_9CLOT
ABC transporter solute-binding protein {ECO:0000313|EMBL:CDA10165.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ABC transporter periplasmic substrate-binding protein
L3_129_030G1_scaffold_683_6
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2971..3318
DNA (348bp) protein (116aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QB79_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY25223.1}; Flags: Fragment;; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Retron-type reverse transcriptase
L3_129_030G1_scaffold_683_7
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3356..3499
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A2Y1_CLOBU
DNA polymerase {ECO:0000313|EMBL:KGK86575.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
retron-type reverse transcriptase
L3_129_030G1_scaffold_683_8
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4020..5012
DNA (993bp) protein (331aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium sp. CAG:265 RepID=R6KRI4_9CLOT
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDB76085.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
binding-protein-dependent transport systems inner membrane component
L3_129_030G1_scaffold_683_9
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5024..5920
DNA (897bp) protein (299aa)
Binding-protein-dependent transport systems inner membrane component n=2 Tax=environmental samples RepID=R6FPS8_9CLOT
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDB76084.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
binding-protein-dependent transport systems inner membrane component
L3_129_030G1_scaffold_683_10
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5944..7554
DNA (1611bp) protein (537aa)
Extracellular solute-binding protein family 1 n=1 Tax=Clostridium sp. CAG:265 RepID=R6KLM6_9CLOT
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CDB76083.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
extracellular solute-binding protein
L3_129_030G1_scaffold_683_11
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7762..9234
DNA (1473bp) protein (491aa)
Sucrose-6-phosphate hydrolase n=2 Tax=environmental samples RepID=R6G1M7_9CLOT
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:CDB76082.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
sucrose-6-phosphate hydrolase
L3_129_030G1_scaffold_683_12
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9292..10323)
DNA (1032bp) protein (344aa)
Putative ribose operon repressor n=1 Tax=Clostridium sp. CAG:265 RepID=R6KRI1_9CLOT
Putative ribose operon repressor {ECO:0000313|EMBL:CDB76080.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
periplasmic binding s and sugar binding domain of LacI family protein
L3_129_030G1_scaffold_683_13
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10476..11810
DNA (1335bp) protein (445aa)
Sucrose-6-phosphate hydrolase n=1 Tax=Clostridium sp. CAG:221 RepID=R6GJT3_9CLOT
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:CDB14452.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
hypothetical protein
L3_129_030G1_scaffold_683_14
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11890..13335
DNA (1446bp) protein (482aa)
PTS system sucrose-specific IIBC component {ECO:0000313|EMBL:EFF64127.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EFF64127.1};; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
PTS system sucrose-specific IIBC component n=2 Tax=Turicibacter RepID=D4W4T5_9FIRM
PTS system sucrose-specific transporter subunit IIBC
L3_129_030G1_scaffold_683_15
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13819..13926
DNA (108bp) protein (36aa)
Pyridine nucleotide-disulphide oxidoreductase family protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FYD5_9CLOT
Pyridine nucleotide-disulphide oxidoreductase family protein {ECO:0000313|EMBL:CDB14354.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
pyridine nucleotide-disulfide oxidoreductase family protein
Displaying 15 items

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