ggKbase home page

L3_129_030G1_scaffold_782

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_030G1_scaffold_782_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..291
DNA (291bp) protein (97aa)
Helix-turn-helix family protein n=24 Tax=Clostridium difficile RepID=T2XBP9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL24554.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Transcriptional regulator, HTH-type
L3_129_030G1_scaffold_782_2
Enterococcus asini, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1135..1638
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Enterococcus asini ATCC 700915 RepID=R2PXA2_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOH89087.1}; TaxID=1158606 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus asini ATCC 700915.;"
mutator MutT protein
L3_129_030G1_scaffold_782_3
unknown

Not on your lists

1871..1981
DNA (111bp) protein (37aa)

This feature has no annotations

L3_129_030G1_scaffold_782_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2149..2802
DNA (654bp) protein (218aa)
Resolvase, N terminal domain protein n=2 Tax=Clostridium difficile RepID=T4Q6X0_CLODI
Resolvase {ECO:0000313|EMBL:CCL24555.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
resolvase
L3_129_030G1_scaffold_782_5
unknown

Not on your lists

comp(3405..3596)
DNA (192bp) protein (64aa)

This feature has no annotations

L3_129_030G1_scaffold_782_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3931..4161
DNA (231bp) protein (77aa)
Uncharacterized protein n=22 Tax=Clostridium difficile RepID=T2XAI2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL24557.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_129_030G1_scaffold_782_7
Clostridium phage phiCD146, Caudovirales, Viruses

Not on your lists

4176..4718
DNA (543bp) protein (181aa)
Phage integrase family protein n=21 Tax=Clostridium difficile RepID=T2XAH5_CLODI
Integrase family protein {ECO:0000313|EMBL:CEK40380.1}; TaxID=1582151 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Clostridium phage phiCD146.;"
integrase family protein
L3_129_030G1_scaffold_782_8
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5428..5901
DNA (474bp) protein (158aa)
Phage-related terminase small subunit-like protein n=1 Tax=Clostridium perfringens F262 RepID=H7CW67_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:KHS56138.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
phage DNA-binding protein
L3_129_030G1_scaffold_782_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6290..6445)
DNA (156bp) protein (52aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T2VRS8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDT81555.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hypothetical protein
L3_129_030G1_scaffold_782_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6551..7102)
DNA (552bp) protein (184aa)
Uncharacterized protein n=25 Tax=Clostridium difficile RepID=T2XCX6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL24544.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
hypothetical protein
L3_129_030G1_scaffold_782_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7180..7377)
DNA (198bp) protein (66aa)
Helix-turn-helix family protein n=2 Tax=Clostridium difficile RepID=T3AEZ3_CLODI
Helix-turn-helix family protein {ECO:0000313|EMBL:EQG73046.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
DNA-binding protein
L3_129_030G1_scaffold_782_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7602..7907
DNA (306bp) protein (102aa)
Uncharacterized protein n=9 Tax=Clostridium difficile RepID=T3IWT8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQG73045.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
hypothetical protein
L3_129_030G1_scaffold_782_13
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8205..9416
DNA (1212bp) protein (404aa)
Putative replication protein n=1 Tax=Clostridium difficile DA00246 RepID=T3WAH1_CLODI
Replication protein {ECO:0000313|EMBL:CEP50373.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
replication protein
L3_129_030G1_scaffold_782_14
unknown

Not on your lists

9639..9947
DNA (309bp) protein (103aa)

This feature has no annotations

L3_129_030G1_scaffold_782_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10126..10605)
DNA (480bp) protein (160aa)
Penicillinase repressor family protein n=26 Tax=Clostridium difficile RepID=T2XE21_CLODI
Penicillinase repressor family protein {ECO:0000313|EMBL:EQG73038.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
regulatory protein
Displaying 15 items

View Taxonomy