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L3_129_030G1_scaffold_793

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_030G1_scaffold_793_1
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(71..301)
DNA (231bp) protein (77aa)
Transporter, major facilitator family protein n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V1X0_9LACO
major facilitator superfamily permease
Drug resistance transporter, EmrB/QacA family {ECO:0000313|EMBL:KFL98122.1}; TaxID=575604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri SV-16A-US.;"
L3_129_030G1_scaffold_793_2
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(294..716)
DNA (423bp) protein (141aa)
Transcriptional regulator n=4 Tax=Lactobacillus gasseri RepID=Q041T7_LACGA
transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EFB62834.1}; TaxID=679196 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 224-1.;"
L3_129_030G1_scaffold_793_3
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(888..998)
DNA (111bp) protein (37aa)
Predicted membrane protein n=4 Tax=Lactobacillus gasseri RepID=Q041T6_LACGA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAS09425.1}; TaxID=257314 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533).;"
L3_129_030G1_scaffold_793_4
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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1234..1683
DNA (450bp) protein (150aa)
UbiC transcription regulator-associated domain protein n=2 Tax=Lactobacillus gasseri RepID=C4VT48_9LACO
Transcriptional regulator {ECO:0000313|EMBL:KFL98125.1}; TaxID=575604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri SV-16A-US.;"
transcriptional regulator
L3_129_030G1_scaffold_793_5
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(1755..3068)
DNA (1314bp) protein (438aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=575604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri SV-16A-US.;"
UDP-N-acetylmuramate--L-alanine ligase n=6 Tax=Lactobacillus gasseri RepID=MURC_LACGA
L3_129_030G1_scaffold_793_6
unknown

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comp(3073..3183)
DNA (111bp) protein (37aa)

This feature has no annotations

L3_129_030G1_scaffold_793_7
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(3453..4097)
DNA (645bp) protein (215aa)
Copper resistance protein n=6 Tax=Lactobacillus gasseri RepID=Q041T2_LACGA
copper resistance protein
CutC family protein {ECO:0000313|EMBL:EFB62831.1}; TaxID=679196 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 224-1.;"
L3_129_030G1_scaffold_793_8
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(4101..5414)
DNA (1314bp) protein (438aa)
PTS system cellobiose transporter subunit IIC (EC:2.7.1.69)
Putative PTS system, cellobiose-specific IIC component n=1 Tax=Lactobacillus johnsonii ATCC 33200 RepID=C2E525_LACJH
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=679196 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 224-1.;"
L3_129_030G1_scaffold_793_9
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5439..5963)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Lactobacillus gasseri 202-4 RepID=C4VT43_9LACO
glycine/sarcosine/betaine reductase selenoprotein B
Uncharacterized protein {ECO:0000313|EMBL:EEJ60075.1}; TaxID=525330 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii ATCC 33200.;"
L3_129_030G1_scaffold_793_10
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5978..6931)
DNA (954bp) protein (318aa)
Asparaginase n=1 Tax=Lactobacillus gasseri 202-4 RepID=C4VT42_9LACO
asparaginase
Asparaginase {ECO:0000313|EMBL:EFB62828.1}; TaxID=679196 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 224-1.;"
L3_129_030G1_scaffold_793_11
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(6948..8264)
DNA (1317bp) protein (439aa)
Putative dipeptidase n=1 Tax=Lactobacillus gasseri 202-4 RepID=C4VT41_9LACO
dipeptidase
Peptidase, M20/M25/M40 family {ECO:0000313|EMBL:KFL98131.1}; TaxID=575604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri SV-16A-US.;"
L3_129_030G1_scaffold_793_12
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8287..9015)
DNA (729bp) protein (243aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Lactobacillus gasseri 202-4 RepID=C4VT40_9LACO
transcriptional regulator
Putative UbiC transcription regulator-associated {ECO:0000313|EMBL:KFL98132.1}; TaxID=575604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri SV-16A-US.;"
L3_129_030G1_scaffold_793_13
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9194..9841)
DNA (648bp) protein (216aa)
tRNA binding domain protein n=2 Tax=Lactobacillus gasseri RepID=C4VT39_9LACO
tRNA-binding protein
tRNA-binding protein {ECO:0000313|EMBL:AJC07504.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_129_030G1_scaffold_793_14
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(9866..10186)
DNA (321bp) protein (107aa)
Thioredoxin n=3 Tax=Lactobacillus gasseri RepID=J2ZMT0_9LACO
Thioredoxin {ECO:0000313|EMBL:EFB62823.1}; TaxID=679196 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 224-1.;"
Thiol-disulfide isomerase or thioredoxin
Displaying 14 items

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