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L3_129_030G1_scaffold_856

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_030G1_scaffold_856_1
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..316
DNA (315bp) protein (105aa)
23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:CBK83231.1}; EC=2.1.1.- {ECO:0000313|EMBL:CBK83231.1};; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9U4_9FIRM
23S rRNA (uracil-5-)-methyltransferase RumA
L3_129_030G1_scaffold_856_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(438..1352)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X935_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48004.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
transcriptional regulator, AraC family
L3_129_030G1_scaffold_856_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1367..1732)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X934_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48003.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
transcriptional regulator, ArsR family
L3_129_030G1_scaffold_856_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1895..2113
DNA (219bp) protein (73aa)
Cadmium-exporting ATPase n=1 Tax=Clostridium sp. D5 RepID=F0YX16_9CLOT
Cadmium-exporting ATPase {ECO:0000313|EMBL:EGB93504.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Cation transport ATPase
L3_129_030G1_scaffold_856_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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2220..4223
DNA (2004bp) protein (668aa)
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase (EC:3.6.3.5)
Cadmium-translocating P-type ATPase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X932_9FIRM
Cadmium-translocating P-type ATPase {ECO:0000313|EMBL:EGJ48001.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_129_030G1_scaffold_856_6
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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4294..4584
DNA (291bp) protein (97aa)
Transcriptional regulator ArsR family n=1 Tax=Dorea sp. CAG:317 RepID=R6W9S5_9FIRM
Transcriptional regulator ArsR family {ECO:0000313|EMBL:CDD07833.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
transcriptional regulatory protein
L3_129_030G1_scaffold_856_7
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5093..5755)
DNA (663bp) protein (221aa)
RNA polymerase sigma factor n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DKZ0_CLOSC
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_129_030G1_scaffold_856_8
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5736..6575)
DNA (840bp) protein (280aa)
Predicted transcriptional regulators n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DKZ1_CLOSC
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBK78365.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_129_030G1_scaffold_856_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6809..7429
DNA (621bp) protein (207aa)
DNA primase (Bacterial type) n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9V0_9FIRM
DNA primase (bacterial type)
DNA primase (Bacterial type) {ECO:0000313|EMBL:CBL01613.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_129_030G1_scaffold_856_10
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7404..8777
DNA (1374bp) protein (458aa)
Phage/plasmid primase P4 family C-terminal domain n=1 Tax=Clostridium sp. CAG:43 RepID=R7A389_9CLOT
Phage/plasmid primase P4 family C-terminal domain {ECO:0000313|EMBL:CDD55263.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
phage/plasmid primase, P4 family, C-terminal domain
L3_129_030G1_scaffold_856_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9053..9271
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=3 Tax=Clostridiales RepID=D4K9V1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01614.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_129_030G1_scaffold_856_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9274..10260
DNA (987bp) protein (329aa)
Plasmid recombination enzyme n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9V2_9FIRM
Plasmid recombination enzyme.
Plasmid recombination enzyme {ECO:0000313|EMBL:CBL01615.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_129_030G1_scaffold_856_13
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10368..10775
DNA (408bp) protein (136aa)
Helix-turn-helix n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HE88_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBK83221.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_129_030G1_scaffold_856_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10762..12402
DNA (1641bp) protein (547aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9V4_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBL01617.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Displaying 14 items

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