ggKbase home page

L3_129_030G1_scaffold_908

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_030G1_scaffold_908_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(105..284)
DNA (180bp) protein (60aa)
LtrC-like protein n=2 Tax=Lactobacillus rhamnosus RepID=K8Q3W0_LACRH
LtrC-like protein {ECO:0000313|EMBL:EKS48526.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
ltrC; putative LtrC
L3_129_030G1_scaffold_908_2
Lactobacillus helveticus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(342..2126)
DNA (1785bp) protein (595aa)
Putative nickase, TraA like protein n=1 Tax=Lactobacillus helveticus (strain H10) RepID=F0NX70_LACHH
Putative nickase, TraA like protein
Putative nickase, TraA like protein {ECO:0000313|EMBL:ADX71209.1}; TaxID=767462 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus helveticus (strain H10).;"
L3_129_030G1_scaffold_908_3
Lactobacillus antri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2345..2554
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P3W6_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EEW54799.1}; TaxID=525309 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus antri DSM 16041.;"
hypothetical protein
L3_129_030G1_scaffold_908_4
Lactobacillus gastricus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2577..2855
DNA (279bp) protein (93aa)
Uncharacterized protein n=5 Tax=Lactobacillus RepID=A0A3D8_LACS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHS85438.1}; TaxID=1144300 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gastricus PS3.;"
L3_129_030G1_scaffold_908_5
Lactobacillus composti, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2845..3444)
DNA (600bp) protein (200aa)
Putative ATPase n=1 Tax=Lactobacillus casei (strain Zhang) RepID=B5XMN4_LACCZ
putative ATPase
Uncharacterized protein {ECO:0000313|EMBL:GAF40894.1}; TaxID=1423734 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus composti DSM 18527 = JCM 14202.;"
L3_129_030G1_scaffold_908_6
Lactobacillus buchneri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3522..3716)
DNA (195bp) protein (65aa)
Uncharacterized protein n=17 Tax=Lactobacillaceae RepID=F4FXS5_LACBN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS01432.1}; TaxID=1071400 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus buchneri CD034.;"
L3_129_030G1_scaffold_908_7
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3754..4068)
DNA (315bp) protein (105aa)
Addiction module antitoxin, RelB n=1 Tax=Lactobacillus casei (strain Zhang) RepID=B5XMN2_LACCZ
Addiction module antitoxin, RelB {ECO:0000313|EMBL:AKI05398.1}; TaxID=1194971 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius str. Ren.;"
relB; addiction module antitoxin, RelB
L3_129_030G1_scaffold_908_8
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4361..5107)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Lactobacillus salivarius (strain UCC118) RepID=A0A3D7_LACS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAQ06347.1}; TaxID=362948 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius (strain UCC118).;"
L3_129_030G1_scaffold_908_9
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5507..6619)
DNA (1113bp) protein (371aa)
Plasmid replication initiation protein n=1 Tax=Lactobacillus gasseri 2016 RepID=T0N1K6_9LACO
Replication initiator protein {ECO:0000313|EMBL:BAH15382.1}; TaxID=1596 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri.;"
repA; Replication initiator protein
L3_129_030G1_scaffold_908_10
Lactobacillus oris, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7215..7463)
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Lactobacillus RepID=C8P3X2_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EFQ53426.1}; TaxID=908339 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus oris PB013-T2-3.;"
hypothetical protein
L3_129_030G1_scaffold_908_11
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7477..8328)
DNA (852bp) protein (284aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P3X3_9LACO
Peptide transporter {ECO:0000313|EMBL:AKI05460.1}; TaxID=1194971 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius str. Ren.;"
Cobyrinic acid ac-diamide synthase
L3_129_030G1_scaffold_908_12
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8439..8774)
DNA (336bp) protein (112aa)
Toxin of toxin-antitoxin stability system n=1 Tax=Lactobacillus salivarius (strain UCC118) RepID=A0A3F5_LACS1
toxin of toxin-antitoxin stability system
Toxin of toxin-antitoxin stability system {ECO:0000313|EMBL:AAQ06340.1}; TaxID=362948 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius (strain UCC118).;"
L3_129_030G1_scaffold_908_13
Lactobacillus oris, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8771..9070)
DNA (300bp) protein (100aa)
Prevent-host-death family protein n=3 Tax=Lactobacillus RepID=C8P3X5_9LACO
Prevent-host-death family protein {ECO:0000313|EMBL:EFQ53433.1}; TaxID=908339 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus oris PB013-T2-3.;"
toxin-antitoxin (TA) system antitoxin
L3_129_030G1_scaffold_908_14
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9366..9497)
DNA (132bp) protein (44aa)
Transposase, mutator family n=1 Tax=Lactobacillus oris F0423 RepID=F9JJK8_9LACO
Uncharacterized protein {ECO:0000313|EMBL:AKI05453.1}; TaxID=1194971 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius str. Ren.;"
transposase
L3_129_030G1_scaffold_908_15
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9536..10027)
DNA (492bp) protein (164aa)
Transposase, Mutator family n=1 Tax=Lactobacillus oris PB013-T2-3 RepID=E3CA05_9LACO
Transposase, Mutator family {ECO:0000313|EMBL:AKI05452.1}; TaxID=1194971 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius str. Ren.;"
IS256 transposase
L3_129_030G1_scaffold_908_16
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10578..11282
DNA (705bp) protein (235aa)
Phosphohydrolase(MutT/nudix family protein) n=1 Tax=Lactobacillus salivarius (strain CECT 5713) RepID=D8IN54_LACSC
Phosphohydrolase(MutT/nudix family protein)
Phosphohydrolase(MutT/nudix family protein) {ECO:0000313|EMBL:AAQ06333.1}; TaxID=362948 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius (strain UCC118).;"
L3_129_030G1_scaffold_908_17
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11398..12837
DNA (1440bp) protein (480aa)
nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Lactobacillus oris F0423 RepID=F9JJG6_9LACO
Nicotinate phosphoribosyltransferase {ECO:0000313|EMBL:AKI05447.1}; TaxID=1194971 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius str. Ren.;"
L3_129_030G1_scaffold_908_18
Lactobacillus oris, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12839..13387
DNA (549bp) protein (183aa)
Isochorismatase family protein {ECO:0000313|EMBL:EFQ53397.1}; EC=3.-.-.- {ECO:0000313|EMBL:EFQ53397.1};; TaxID=908339 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus oris PB013-T2-3.;"
yueJ; protein yueJ (EC:3.5.1.19)
Isochorismatase family protein n=2 Tax=Lactobacillus RepID=C8P3Y9_9LACO
L3_129_030G1_scaffold_908_19
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13661..14224
DNA (564bp) protein (188aa)
Transposase n=1 Tax=Lactobacillus fermentum MTCC 8711 RepID=T0SIL5_LACFE
Transposase {ECO:0000313|EMBL:EQC58697.1}; TaxID=1366052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum MTCC 8711.;"
Transposase
L3_129_030G1_scaffold_908_20
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14455..15066
DNA (612bp) protein (204aa)
Transposase, IS3 family n=1 Tax=Lactobacillus fermentum F-6 RepID=R4RI43_LACFE
Transposase, IS3 family
Transposase, IS3 family {ECO:0000313|EMBL:AGL88026.1}; TaxID=767453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum F-6.;"
L3_129_030G1_scaffold_908_21
Pediococcus pentosaceus, Pediococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15136..15342)
DNA (207bp) protein (69aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=278197 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Pediococcus.;" source="Pediococcus pentosaceus (strain ATCC 25745 / 183-1w).;"
Peptide methionine sulfoxide reductase MsrA n=3 Tax=Pediococcus pentosaceus RepID=Q03FL3_PEDPA
peptide methionine sulfoxide reductase
L3_129_030G1_scaffold_908_22
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15347..16363)
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=Streptococcus intermedius F0395 RepID=G6A723_STRIT
Uncharacterized protein {ECO:0000313|EMBL:AKI05442.1}; TaxID=1194971 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius str. Ren.;"
histidine kinase
L3_129_030G1_scaffold_908_23
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16369..17070)
DNA (702bp) protein (234aa)
Response regulator n=6 Tax=Streptococcus pseudopneumoniae RepID=G0IAX0_STRES
Transcriptional regulator {ECO:0000313|EMBL:AKI05441.1}; TaxID=1194971 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius str. Ren.;"
response regulator
L3_129_030G1_scaffold_908_24
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17108..17620)
DNA (513bp) protein (171aa)
Uncharacterized protein {ECO:0000313|EMBL:AKI05440.1}; TaxID=1194971 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius str. Ren.;"
Displaying 24 items

View Taxonomy