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L3_129_030G1_scaffold_215

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_030G1_scaffold_215_1
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..669)
DNA (669bp) protein (223aa)
ABC-type dipeptide transport system periplasmic component n=1 Tax=Clostridium sp. CAG:58 RepID=R6R954_9CLOT
ABC-type dipeptide transport system periplasmic component {ECO:0000313|EMBL:CDC44395.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
ABC-type dipeptide transport system, periplasmic component
L3_129_030G1_scaffold_215_2
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1224..2852)
DNA (1629bp) protein (543aa)
ABC-type dipeptide transport system periplasmic component n=1 Tax=Clostridium sp. CAG:58 RepID=R6RRN5_9CLOT
ABC-type dipeptide transport system periplasmic component {ECO:0000313|EMBL:CDC50365.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
ABC-type dipeptide transport system, periplasmic component
L3_129_030G1_scaffold_215_3
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3115..4185
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RYB1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC50364.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_129_030G1_scaffold_215_4
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4121..4567)
DNA (447bp) protein (149aa)
Uncharacterized conserved protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RN56_9CLOT
Uncharacterized conserved protein {ECO:0000313|EMBL:CDC50363.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_129_030G1_scaffold_215_5
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4564..5337)
DNA (774bp) protein (258aa)
Uncharacterized conserved protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6SUU2_9CLOT
Uncharacterized conserved protein {ECO:0000313|EMBL:CDC50362.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_129_030G1_scaffold_215_6
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5401..7395)
DNA (1995bp) protein (665aa)
Ferrous iron transporter B n=1 Tax=Clostridium sp. CAG:58 RepID=R6S4V8_9CLOT
Ferrous iron transporter B {ECO:0000313|EMBL:CDC50361.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
ferrous iron transport protein B
L3_129_030G1_scaffold_215_7
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7376..7618)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RRM9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC50360.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Fe2+ transport system protein A
L3_129_030G1_scaffold_215_8
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7726..9726)
DNA (2001bp) protein (667aa)
UvrABC system protein B n=1 Tax=Clostridium sp. CAG:58 RepID=R6RYA7_9CLOT
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
excinuclease ABC, B subunit
L3_129_030G1_scaffold_215_9
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10211..11236)
DNA (1026bp) protein (342aa)
Periplasmic binding protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RN51_9CLOT
Periplasmic binding protein {ECO:0000313|EMBL:CDC50358.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
ABC-type enterochelin transport system, periplasmic component
L3_129_030G1_scaffold_215_10
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11278..12030)
DNA (753bp) protein (251aa)
ABC-type enterochelin transport system, ATPase component (EC:3.6.3.34)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6SUT7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC50357.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_129_030G1_scaffold_215_11
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12033..13010)
DNA (978bp) protein (326aa)
Iron chelate uptake ABC transporter FeCT family permease protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6S4V3_9CLOT
Iron chelate uptake ABC transporter FeCT family permease protein {ECO:0000313|EMBL:CDC50356.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
ABC-type enterochelin transport system, permease component
L3_129_030G1_scaffold_215_12
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13007..14017)
DNA (1011bp) protein (337aa)
Iron chelate uptake ABC transporter FeCT family permease protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RRM3_9CLOT
Iron chelate uptake ABC transporter FeCT family permease protein {ECO:0000313|EMBL:CDC50355.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
ABC transporter permease subunit
L3_129_030G1_scaffold_215_13
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14290..15471)
DNA (1182bp) protein (394aa)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
LL-diaminopimelate aminotransferase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RYA1_9CLOT
LL-diaminopimelate aminotransferase
L3_129_030G1_scaffold_215_14
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15468..16910)
DNA (1443bp) protein (481aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RN46_9CLOT
L3_129_030G1_scaffold_215_15
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16938..18776)
DNA (1839bp) protein (613aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
glmS; glucosamine-6-phosphate synthase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Clostridium sp. CAG:58 RepID=R6SUT2_9CLOT
L3_129_030G1_scaffold_215_16
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18781..20394)
DNA (1614bp) protein (538aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Clostridium sp. CAG:58 RepID=R6S4U9_9CLOT
L3_129_030G1_scaffold_215_17
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20391..21731)
DNA (1341bp) protein (447aa)
cysD; putative O-acetylhomoserine (thiol)-lyase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y1I0_9FIRM
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:EPD58343.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L3_129_030G1_scaffold_215_18
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21753..23849)
DNA (2097bp) protein (699aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RN41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC50348.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_129_030G1_scaffold_215_19
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24169..25380
DNA (1212bp) protein (404aa)
Glutamate--ammonia ligase n=1 Tax=Clostridium sp. CAG:58 RepID=R6SUS6_9CLOT
Glutamate--ammonia ligase {ECO:0000313|EMBL:CDC50347.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_129_030G1_scaffold_215_20
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25408..25992
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6S4U2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC50346.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
response regulator with putative antiterminator output domain
L3_129_030G1_scaffold_215_21
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26040..28268)
DNA (2229bp) protein (743aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RRK9_9CLOT
L3_129_030G1_scaffold_215_22
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(28527..28793)
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=1 Tax=Clostridium sp. CAG:58 RepID=R6RY93_9CLOT
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
SSU ribosomal protein S15P
L3_129_030G1_scaffold_215_23
unknown

Not on your lists

comp(28790..28921)
DNA (132bp) protein (44aa)

This feature has no annotations

L3_129_030G1_scaffold_215_24
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28938..29876)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RN37_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC50343.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Rhodanese domain protein precursor (modular protein)
L3_129_030G1_scaffold_215_25
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29995..30774
DNA (780bp) protein (260aa)
DedA family protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6SUS1_9CLOT
DedA family protein {ECO:0000313|EMBL:CDC50342.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
putative integral inner membrane protein
L3_129_030G1_scaffold_215_26
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30761..31489
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWU4_CLOSD
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CBH20909.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
L3_129_030G1_scaffold_215_27
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31482..32303
DNA (822bp) protein (274aa)
SNARE associated Golgi protein-related protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z1I8_DESAT
Uncharacterized protein {ECO:0000313|EMBL:KEZ84896.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
L3_129_030G1_scaffold_215_28
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32266..32940)
DNA (675bp) protein (225aa)
Glycosyl transferase family 2 n=1 Tax=Clostridium sp. CAG:242 RepID=R6CQ00_9CLOT
Glycosyl transferase family 2 {ECO:0000313|EMBL:CDA78798.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
hypothetical protein
L3_129_030G1_scaffold_215_29
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32937..33947)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RRK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC50340.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
aminoglycoside phosphotransferase
L3_129_030G1_scaffold_215_30
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33944..34603)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RY89_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC50339.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
Displaying items 1-30 of 62 in total

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