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L3_129_030G1_scaffold_95

Search features with annotation key words

Displaying items 1-30 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_030G1_scaffold_95_1
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

228..713
DNA (486bp) protein (162aa)
cro regulatory protein n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B7294E
Uncharacterized protein {ECO:0000313|EMBL:ESL13309.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
DNA-binding protein
L3_129_030G1_scaffold_95_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

735..1205
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM42297.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_129_030G1_scaffold_95_3
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1355..2884
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MD66_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF54333.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_129_030G1_scaffold_95_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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2899..3780
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=T5S0E8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQN61079.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_129_030G1_scaffold_95_5
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3882..4940
DNA (1059bp) protein (353aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=E0QLI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJP25801.1}; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium AS15.;"
L3_129_030G1_scaffold_95_6
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5109..5456
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSE6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35695.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
protein of unknown function DUF805
L3_129_030G1_scaffold_95_7
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5493..6110
DNA (618bp) protein (206aa)
Ribosome maturation factor RimP n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VT78_9CLOT
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L3_129_030G1_scaffold_95_8
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6179..7240
DNA (1062bp) protein (354aa)
Transcription termination factor NusA n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VT34_9CLOT
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
nusA; transcription elongation protein NusA
L3_129_030G1_scaffold_95_9
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7263..7541
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXN0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35692.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L3_129_030G1_scaffold_95_10
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7531..7932
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTU2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35691.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L3_129_030G1_scaffold_95_11
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8033..10420
DNA (2388bp) protein (796aa)
Translation initiation factor IF-2 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSE1_9CLOT
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
infB; translation initiation factor IF-2
L3_129_030G1_scaffold_95_12
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10559..10936
DNA (378bp) protein (126aa)
Ribosome-binding factor A n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VT75_9CLOT
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
rbfA; ribosome-binding factor A
L3_129_030G1_scaffold_95_13
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10933..11898
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VT30_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35688.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
phosphoesterase RecJ domain-containing protein
L3_129_030G1_scaffold_95_14
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11899..12810
DNA (912bp) protein (304aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
tRNA pseudouridine 55 synthase (EC:5.4.99.12)
tRNA pseudouridine synthase B n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXM4_9CLOT
L3_129_030G1_scaffold_95_15
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12848..13747
DNA (900bp) protein (300aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
ribC; flavokinase/FAD synthetase (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTT9_9CLOT
L3_129_030G1_scaffold_95_16
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13827..14957)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VT98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35461.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
rodA-1; rod shape-determining protein RodA
L3_129_030G1_scaffold_95_17
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15175..16842
DNA (1668bp) protein (556aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VX40_9CLOT
L3_129_030G1_scaffold_95_18
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17030..19132
DNA (2103bp) protein (701aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036DD12E
Putative cell division protein FtsA {ECO:0000313|EMBL:EJF42129.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
ftsA; putative cell division protein FtsA
L3_129_030G1_scaffold_95_19
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19160..20941
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5C5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ40125.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
amidotransferase
L3_129_030G1_scaffold_95_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21454..21849
DNA (396bp) protein (132aa)
Flagellar basal-body rod protein FlgB n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJS1_9FIRM
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
flgB; flagellar basal-body rod protein FlgB
L3_129_030G1_scaffold_95_21
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21888..22343
DNA (456bp) protein (152aa)
Flagellar basal-body rod protein FlgC n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KYG5_OSCVS
flgC; flagellar basal-body rod protein FlgC
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_129_030G1_scaffold_95_22
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22364..22669
DNA (306bp) protein (102aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KYG4_OSCVS
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
flagellar hook-basal body complex protein FliE
L3_129_030G1_scaffold_95_23
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22703..24355
DNA (1653bp) protein (551aa)
Flagellar M-ring protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZJJ8_9CLOT
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
fliF; flagellar M-ring protein
L3_129_030G1_scaffold_95_24
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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24352..25365
DNA (1014bp) protein (338aa)
Flagellar motor switch protein FliG n=1 Tax=Firmicutes bacterium ASF500 RepID=V2Y141_9FIRM
Flagellar motor switch protein FliG {ECO:0000313|EMBL:ESL15704.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
fliG; flagellar motor switch protein FliG
L3_129_030G1_scaffold_95_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25358..26215
DNA (858bp) protein (286aa)
Putative ATP synthase F1, delta subunit n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YN83_9FIRM
Putative ATP synthase F1, delta subunit {ECO:0000313|EMBL:EHM53543.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
fliH; flagellar assembly protein fliH
L3_129_030G1_scaffold_95_26
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26238..27545
DNA (1308bp) protein (436aa)
fliI; flagellum-specific ATP synthase (EC:3.6.3.14)
Flagellar protein export ATPase FliI n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M245_9FIRM
Flagellar protein export ATPase FliI {ECO:0000313|EMBL:EOS65134.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L3_129_030G1_scaffold_95_27
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27595..28044
DNA (450bp) protein (150aa)
Flagellar export protein FliJ n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9RA19_CLOSW
flagellar export protein FliJ
Flagellar export protein FliJ {ECO:0000313|EMBL:ADL05991.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_129_030G1_scaffold_95_28
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28095..29210
DNA (1116bp) protein (372aa)
Flagellar hook-length control protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B536_9CLOT
Flagellar hook-length control protein {ECO:0000313|EMBL:ERI73249.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_129_030G1_scaffold_95_29
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29254..29910
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MB88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65137.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
flgD; flagellar hook capping protein FlgD
L3_129_030G1_scaffold_95_30
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29928..30302
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JK34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31063.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
flagellar operon protein
Displaying items 1-30 of 125 in total

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