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L3_129_030G1_scaffold_240

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_030G1_scaffold_240_1
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(449..1324)
DNA (876bp) protein (292aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSI0_9CLOT
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EOQ35453.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
sdhA; L-serine dehydratase, iron-sulfur-dependent subunit alpha
L3_129_030G1_scaffold_240_2
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1336..1995)
DNA (660bp) protein (220aa)
L-serine dehydratase, iron-sulfur-dependent subunit beta (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSM5_9CLOT
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EOQ35454.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_129_030G1_scaffold_240_3
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2081..3286)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VRT9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35455.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Na+/H+-dicarboxylate symporters
L3_129_030G1_scaffold_240_4
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3996..6326
DNA (2331bp) protein (777aa)
ribonucleoside-triphosphate reductase catalytic subunit (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VT94_9CLOT
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EOQ35456.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_129_030G1_scaffold_240_5
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6353..6556
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VX37_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35457.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L3_129_030G1_scaffold_240_6
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6510..7070
DNA (561bp) protein (187aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSI3_9CLOT
L3_129_030G1_scaffold_240_7
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7246..8007
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1Z9Z1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ10833.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
hypothetical protein
L3_129_030G1_scaffold_240_8
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8130..8630
DNA (501bp) protein (167aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSD6_9CLOT
TrmH family RNA methyltransferase
L3_129_030G1_scaffold_240_9
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8646..9527
DNA (882bp) protein (294aa)
DegV family EDD domain-containing protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VT70_9CLOT
DegV family EDD domain-containing protein {ECO:0000313|EMBL:EOQ35684.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
EDD domain protein, DegV family
L3_129_030G1_scaffold_240_10
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9787..10977
DNA (1191bp) protein (397aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
pgk; Phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VT25_9CLOT
L3_129_030G1_scaffold_240_11
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11106..11876
DNA (771bp) protein (257aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
tpiA; Triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXL9_9CLOT
L3_129_030G1_scaffold_240_12
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11969..13555
DNA (1587bp) protein (529aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTT5_9CLOT
L3_129_030G1_scaffold_240_13
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13612..14922
DNA (1311bp) protein (437aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSD1_9CLOT
L3_129_030G1_scaffold_240_14
unknown

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15176..16021
DNA (846bp) protein (282aa)

This feature has no annotations

L3_129_030G1_scaffold_240_15
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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16079..16768
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y8S0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD30325.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L3_129_030G1_scaffold_240_16
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17049..17990
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VT66_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35679.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
putative polysaccharide deacetylase
L3_129_030G1_scaffold_240_17
Paenibacillus terrae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(18159..18602)
DNA (444bp) protein (148aa)
MarR family transcriptional regulator n=1 Tax=Paenibacillus terrae (strain HPL-003) RepID=G7VZK6_PAETH
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:AET57248.1}; TaxID=985665 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus terrae (strain HPL-003).;"
L3_129_030G1_scaffold_240_18
unknown

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18859..18978
DNA (120bp) protein (40aa)

This feature has no annotations

L3_129_030G1_scaffold_240_19
Psychrobacter sp. G, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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19124..20302
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Psychrobacter sp. G RepID=S4YXE4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP50044.1}; TaxID=571800 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp. G.;"
L3_129_030G1_scaffold_240_20
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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20350..21525
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZP36_9CLOT
bile acid-inducible operon protein F
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
L3_129_030G1_scaffold_240_21
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21574..22776
DNA (1203bp) protein (401aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R1C5_CLOSW
L-carnitine dehydratase/bile acid-inducible protein F
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ADL06448.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_129_030G1_scaffold_240_22
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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23191..23604
DNA (414bp) protein (138aa)
Thioesterase superfamily protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y013_LEPCP
4-hydroxybenzoyl-CoA thioesterase family active site {ECO:0000313|EMBL:KJR47178.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
thioesterase superfamily protein
L3_129_030G1_scaffold_240_23
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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23632..25284
DNA (1653bp) protein (551aa)
Transporter, betaine/carnitine/choline family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFZ4_9FIRM
Transporter, betaine/carnitine/choline family {ECO:0000313|EMBL:EEQ57129.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
choline-glycine betaine transporter
L3_129_030G1_scaffold_240_24
[Eubacterium] infirmum, Clostridiales, Clostridia, Firmicutes, Bacteria

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25376..27001
DNA (1626bp) protein (542aa)
60 kDa chaperonin n=1 Tax=Eubacterium infirmum F0142 RepID=H1PMZ6_9FIRM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=883109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium infirmum F0142.;"
groEL; chaperonin GroEL
L3_129_030G1_scaffold_240_25
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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27725..29008
DNA (1284bp) protein (428aa)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VT20_9CLOT
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:EOQ35678.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
O-acetylhomoserine (thiol)-lyase
L3_129_030G1_scaffold_240_26
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29021..29959
DNA (939bp) protein (313aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
cysteine synthase (EC:2.5.1.47)
Cysteine synthase A n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXL4_9CLOT
L3_129_030G1_scaffold_240_27
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30169..30330
DNA (162bp) protein (54aa)
Rubredoxin n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTT0_9CLOT
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
rub; rubredoxin Rub
L3_129_030G1_scaffold_240_28
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30662..32017)
DNA (1356bp) protein (452aa)
MATE efflux family protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LZG8_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EOS63923.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
MATE efflux family protein
L3_129_030G1_scaffold_240_29
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32234..33616)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35433.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
cell wall binding repeat 2-containing protein
L3_129_030G1_scaffold_240_30
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33979..35502)
DNA (1524bp) protein (508aa)
Mg chelatase-like protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSJ1_9CLOT
Mg chelatase-like protein {ECO:0000313|EMBL:EOQ35434.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
putative magnesium chelatase
Displaying items 1-30 of 60 in total

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