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L3_129_245G1_scaffold_1403

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Displaying items 1-30 of 108 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_245G1_scaffold_1403_1
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3..419
DNA (417bp) protein (139aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=I9T5R1_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EOA54492.1}; Flags: Fragment;; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
transposase is204/is1001/is1096/is1165 family protein
L3_129_245G1_scaffold_1403_2
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

782..1867
DNA (1086bp) protein (362aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
Putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6ABS6_9BACE
Putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:CDA49403.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
L3_129_245G1_scaffold_1403_3
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1959..2351)
DNA (393bp) protein (131aa)
Histidine triad domain protein n=2 Tax=Bacteroides RepID=B0NRH1_BACSE
Histidine triad domain protein {ECO:0000313|EMBL:EDS14397.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
histidine triad (HIT) protein
L3_129_245G1_scaffold_1403_4
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2403..2858)
DNA (456bp) protein (152aa)
Transcription elongation factor GreA n=3 Tax=Bacteroides RepID=B0NRH2_BACSE
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
transcription elongation factor GreA
L3_129_245G1_scaffold_1403_5
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3059..4210)
DNA (1152bp) protein (384aa)
Antioxidant AhpC/TSA family n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AEE4_9BACE
Antioxidant AhpC/TSA family {ECO:0000313|EMBL:CDA49410.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
alkyl hydroperoxide reductase
L3_129_245G1_scaffold_1403_6
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4596..6371
DNA (1776bp) protein (592aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AS77_9BACE
L3_129_245G1_scaffold_1403_7
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6540..7100
DNA (561bp) protein (187aa)
RNA polymerase sigma-70 factor n=2 Tax=Bacteroides RepID=B0NRH7_BACSE
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CDA49412.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
putative RNA polymerase ECF-type sigma factor
L3_129_245G1_scaffold_1403_8
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7138..8154
DNA (1017bp) protein (339aa)
Sigma factor regulatory protein FecR/PupR family n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6ABT7_9BACE
Sigma factor regulatory protein FecR/PupR family {ECO:0000313|EMBL:CDA49413.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
putative anti-sigma factor
L3_129_245G1_scaffold_1403_9
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8357..11593
DNA (3237bp) protein (1079aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AKU5_9BACE
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDA49414.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_129_245G1_scaffold_1403_10
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11687..13312
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AEF0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA49415.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_129_245G1_scaffold_1403_11
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13723..14784)
DNA (1062bp) protein (354aa)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
butyrate kinase (EC:2.7.2.7)
Probable butyrate kinase n=1 Tax=Bacteroides stercoris CC31F RepID=S3YFR5_BACSE
L3_129_245G1_scaffold_1403_12
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14800..15756)
DNA (957bp) protein (319aa)
phosphate butyryltransferase (EC:2.3.1.19)
Phosphate acetyl/butyryl transferase n=3 Tax=Bacteroides RepID=B0NRI3_BACSE
Phosphate acetyl/butyryl transferase {ECO:0000313|EMBL:CDA49417.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
L3_129_245G1_scaffold_1403_13
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16114..17052
DNA (939bp) protein (313aa)
LD-carboxypeptidase n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6ABU3_9BACE
LD-carboxypeptidase {ECO:0000313|EMBL:CDA49418.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
peptidase U61
L3_129_245G1_scaffold_1403_14
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17049..18047
DNA (999bp) protein (333aa)
Peptidase, M28 family n=2 Tax=Bacteroides stercoris RepID=B0NRI6_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH21872.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
Predicted aminopeptidases
L3_129_245G1_scaffold_1403_15
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18068..18496
DNA (429bp) protein (143aa)
Fe-S metabolism associated domain protein n=2 Tax=Bacteroides RepID=B0NRI7_BACSE
Fe-S metabolism associated domain protein {ECO:0000313|EMBL:EDS14413.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
cysteine desulfurase
L3_129_245G1_scaffold_1403_16
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18682..18870)
DNA (189bp) protein (63aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NRI8_BACSE
Uncharacterized protein {ECO:0000313|EMBL:CDA49421.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
transcriptional regulator
L3_129_245G1_scaffold_1403_17
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18916..19584)
DNA (669bp) protein (223aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NRI9_BACSE
Uncharacterized protein {ECO:0000313|EMBL:CDA49422.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_129_245G1_scaffold_1403_18
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19581..20366)
DNA (786bp) protein (262aa)
CAAX amino terminal protease family protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NRJ0_BACSE
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EDS14416.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Abortive infection protein
L3_129_245G1_scaffold_1403_19
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20419..20508)
DNA (90bp) protein (30aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6AKV6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA49424.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
L3_129_245G1_scaffold_1403_20
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20718..21638)
DNA (921bp) protein (307aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
riboflavin kinase; FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NRJ1_BACSE
L3_129_245G1_scaffold_1403_21
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21660..22277)
DNA (618bp) protein (206aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NRJ2_BACSE
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EDS14418.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
HAD-superfamily hydrolase, subfamily IA, variant 3
L3_129_245G1_scaffold_1403_22
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22282..24966)
DNA (2685bp) protein (895aa)
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EDS14420.1}; EC=3.6.3.8 {ECO:0000313|EMBL:EDS14420.1};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NRJ3_BACSE
calcium-translocating P-type ATPase, PMCA-type
L3_129_245G1_scaffold_1403_23
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25209..25370
DNA (162bp) protein (54aa)
Rubredoxin n=3 Tax=Bacteroides RepID=B0NRJ6_BACSE
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
Rubredoxin-type Fe(Cys)4 protein
L3_129_245G1_scaffold_1403_24
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25367..27064)
DNA (1698bp) protein (566aa)
Na/Pi-cotransporter II-like protein n=3 Tax=Bacteroides RepID=B0NRJ7_BACSE
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:EDS14423.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Na/Pi-cotransporter II-related protein
L3_129_245G1_scaffold_1403_25
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27148..28704
DNA (1557bp) protein (519aa)
Phosphoribulokinase/uridine kinase family protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NRJ8_BACSE
Phosphoribulokinase/uridine kinase family protein {ECO:0000313|EMBL:EDS14424.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
uridine kinase
L3_129_245G1_scaffold_1403_26
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28921..30426
DNA (1506bp) protein (502aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6ASA2_9BACE
integral membrane sensor signal transduction histidine kinase
L3_129_245G1_scaffold_1403_27
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30512..31885)
DNA (1374bp) protein (458aa)
Peptidase, M24 family {ECO:0000313|EMBL:EDS14426.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDS14426.1};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Peptidase, M24 family n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NRK0_BACSE
peptidase M24
L3_129_245G1_scaffold_1403_28
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32111..33601
DNA (1491bp) protein (497aa)
RNA polymerase sigma-54 factor n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6ABW1_9BACE
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:CDA49433.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
RNA polymerase, sigma 54 subunit, RpoN/SigL
L3_129_245G1_scaffold_1403_29
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33653..34330
DNA (678bp) protein (226aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NRK2_BACSE
Uncharacterized protein {ECO:0000313|EMBL:CDA49434.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_129_245G1_scaffold_1403_30
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34363..34743
DNA (381bp) protein (127aa)
Glycine cleavage system H protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AEH1_9BACE
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
glycine cleavage system H protein
Displaying items 1-30 of 108 in total

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