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L3_129_245G1_scaffold_438

Search features with annotation key words

Displaying items 1-30 of 47 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_129_245G1_scaffold_438_1
unknown

Not on your lists

comp(2..88)
DNA (87bp) protein (29aa)

This feature has no annotations

L3_129_245G1_scaffold_438_2
unknown

Not on your lists

comp(85..177)
DNA (93bp) protein (31aa)

This feature has no annotations

L3_129_245G1_scaffold_438_3
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(174..698)
DNA (525bp) protein (175aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=G6BU08_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EFF67575.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
hypothetical protein
L3_129_245G1_scaffold_438_4
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(776..1081)
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=A5N2V5_CLOK5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH08101.1}; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 12016).;"
L3_129_245G1_scaffold_438_5
unknown

Not on your lists

comp(1111..1596)
DNA (486bp) protein (162aa)

This feature has no annotations

L3_129_245G1_scaffold_438_6
unknown

Not on your lists

comp(1601..1753)
DNA (153bp) protein (51aa)

This feature has no annotations

L3_129_245G1_scaffold_438_7
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1771..2757)
DNA (987bp) protein (329aa)
Cobalamin biosynthesis protein CobD n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FSZ1_9FIRM
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
cobalamin biosynthesis protein CobD
L3_129_245G1_scaffold_438_8
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2778..3485)
DNA (708bp) protein (236aa)
Fructose-2,6-bisphosphatase (EC:3.1.3.73)
Phosphoglycerate mutase family protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FSZ2_9FIRM
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EEG94221.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_129_245G1_scaffold_438_9
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3458..3790)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FSZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94222.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_129_245G1_scaffold_438_10
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3828..4592)
DNA (765bp) protein (255aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Cobalamin-5-phosphate synthase (EC:2.7.8.26)
Cobalamin synthase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FSZ4_9FIRM
L3_129_245G1_scaffold_438_11
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4597..5181)
DNA (585bp) protein (195aa)
Adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FSZ5_9FIRM
Adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase {ECO:0000313|EMBL:EEG94224.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
putative cobinamide kinase/cobinamide phosphate guanylyltransferase
L3_129_245G1_scaffold_438_12
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5236..6276)
DNA (1041bp) protein (347aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00013344}; EC=2.4.2.21 {ECO:0000256|SAAS:SAAS00013328};; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HZ67_9FIRM
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
L3_129_245G1_scaffold_438_13
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6352..7941)
DNA (1590bp) protein (530aa)
adenosylcobyric acid synthase (glutamine-hydrolysing) (EC:6.3.5.10)
Cobyric acid synthase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FSZ8_9FIRM
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_129_245G1_scaffold_438_14
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7929..9041)
DNA (1113bp) protein (371aa)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components (EC:3.6.3.34)
ABC transporter, ATP-binding protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FSZ9_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG94228.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_129_245G1_scaffold_438_15
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9128..10162)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R5HJP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29818.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ABC-type Fe3+-siderophore transport system, permease component
L3_129_245G1_scaffold_438_16
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10131..11282)
DNA (1152bp) protein (384aa)
Periplasmic binding protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FT02_9FIRM
Periplasmic binding protein {ECO:0000313|EMBL:EEG94231.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
ABC-type Fe3+-hydroxamate transport system, periplasmic component
L3_129_245G1_scaffold_438_17
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11279..11758)
DNA (480bp) protein (160aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FT03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94232.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_129_245G1_scaffold_438_18
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12236..13141)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HJ82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29815.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
LysR family transcriptional regulator
L3_129_245G1_scaffold_438_19
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13257..14018
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FT06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94235.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_129_245G1_scaffold_438_20
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14005..15345
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HJP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29813.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_129_245G1_scaffold_438_21
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15365..15643)
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FT08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94237.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_129_245G1_scaffold_438_22
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15675..16106)
DNA (432bp) protein (144aa)
Flavodoxin n=2 Tax=Roseburia RepID=C0FT09_9FIRM
Flavodoxin {ECO:0000313|EMBL:EEG94238.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
flavodoxin, short chain
L3_129_245G1_scaffold_438_23
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16221..16811)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FT10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94239.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_129_245G1_scaffold_438_24
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16920..18266)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HNU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29809.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
MATE efflux family protein
L3_129_245G1_scaffold_438_25
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18283..18732)
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FT12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29808.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_129_245G1_scaffold_438_26
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18799..19728)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FT13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94242.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_129_245G1_scaffold_438_27
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20102..21016)
DNA (915bp) protein (305aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Uncharacterized protein n=2 Tax=Roseburia RepID=R5HZ58_9FIRM
quinolinate synthetase A
L3_129_245G1_scaffold_438_28
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21286..22452
DNA (1167bp) protein (389aa)
Aspartate oxidase (EC:1.4.3.16)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HJ71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29805.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_129_245G1_scaffold_438_29
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22454..23308
DNA (855bp) protein (285aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide diphosphorylase (Carboxylating) n=2 Tax=Roseburia RepID=C0FT16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29804.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_129_245G1_scaffold_438_30
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23324..23887
DNA (564bp) protein (188aa)
3H domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FT17_9FIRM
3H domain protein {ECO:0000313|EMBL:EEG94246.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
Displaying items 1-30 of 47 in total

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