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L3_130_000G1_scaffold_6080

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_6080_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..380)
DNA (378bp) protein (126aa)
Transcription termination factor NusA n=4 Tax=Bifidobacterium breve RepID=F6C790_BIFBA
N utilization substance protein A
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_130_000G1_scaffold_6080_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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584..1312
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CRP3_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI86718.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_130_000G1_scaffold_6080_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1279..1962)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DYG5_BIFBR
Transcriptional regulator, LacI family, probably non-functional as N-terminal HTH region is missing
Uncharacterized protein {ECO:0000313|EMBL:ERI86717.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_130_000G1_scaffold_6080_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2175..2975)
DNA (801bp) protein (267aa)
Transglutaminase-like protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E347_BIFBR
Transglutaminase-like protein {ECO:0000313|EMBL:ERI86716.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Hypothetical protein in transglutaminase family
L3_130_000G1_scaffold_6080_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3121..5301)
DNA (2181bp) protein (727aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C795_BIFBA
Conserved hypothetical protein with DUF404 and DUF407 domains
Uncharacterized protein {ECO:0000313|EMBL:EPD75941.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_130_000G1_scaffold_6080_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5462..6373)
DNA (912bp) protein (304aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
tRNA pseudouridine synthase A n=6 Tax=Bifidobacterium breve RepID=F6C796_BIFBA
tRNA pseudouridine synthase A
L3_130_000G1_scaffold_6080_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(6542..7069)
DNA (528bp) protein (176aa)
50S ribosomal protein L17 n=2 Tax=Bifidobacterium breve RepID=D4BQT8_BIFBR
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
rplQ; 50S ribosomal protein L17
L3_130_000G1_scaffold_6080_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7166..8008)
DNA (843bp) protein (281aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
DNA-directed RNA polymerase subunit alpha n=6 Tax=Bifidobacterium breve RepID=F6C798_BIFBA
DNA-directed RNA polymerase alpha chain
Displaying 8 items

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