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L3_130_000G1_scaffold_7843

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_7843_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..872)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CAN2_BIFBR
Hypothetical protein with ErfK/YbiS/YcfS/YnhG domain
Uncharacterized protein {ECO:0000313|EMBL:ERI87549.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_130_000G1_scaffold_7843_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1033..2370)
DNA (1338bp) protein (446aa)
pyrG; CTP synthase (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
CTP synthase n=2 Tax=Bifidobacterium breve RepID=F9XZL1_BIFBU
L3_130_000G1_scaffold_7843_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2693..3139)
DNA (447bp) protein (149aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
3-dehydroquinate dehydratase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZL0_BIFBU
aroQ; 3-dehydroquinate dehydratase
L3_130_000G1_scaffold_7843_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3291..3422)
DNA (132bp) protein (44aa)
3-dehydroquinate synthase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CTZ8_BIFBR
Shikimate kinase/3-dehydroquinate synthase
Shikimate kinase/3-dehydroquinate synthase {ECO:0000313|EMBL:AHJ19168.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_130_000G1_scaffold_7843_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3422..4831)
DNA (1410bp) protein (470aa)
3-dehydroquinate synthase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CTZ8_BIFBR
3-dehydroquinate synthase {ECO:0000313|EMBL:ERI87553.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Shikimate kinase/3-dehydroquinate synthase
L3_130_000G1_scaffold_7843_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4866..6053)
DNA (1188bp) protein (396aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Chorismate synthase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CAN7_BIFBR
Chorismate synthase
L3_130_000G1_scaffold_7843_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6102..6500
DNA (399bp) protein (133aa)
Peptidase, A24 family n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L2M4_BIFBR
putative TadV type IV secretion peptidase
Putative TadV type IV secretion peptidase {ECO:0000313|EMBL:AHJ21073.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_130_000G1_scaffold_7843_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6520..7593)
DNA (1074bp) protein (358aa)
YceG family protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E0D8_BIFBR
pabC; Hypothetical protein with aminodeoxychorismate lyase domain
Uncharacterized protein {ECO:0000313|EMBL:BAQ99899.1}; YceG family protein {ECO:0000313|EMBL:EFE89466.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_130_000G1_scaffold_7843_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7606..8058)
DNA (453bp) protein (151aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Putative Holliday junction resolvase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CTV0_BIFBR
RNAse H domain protein, YqgF family
L3_130_000G1_scaffold_7843_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(8067..10745)
DNA (2679bp) protein (893aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Alanine--tRNA ligase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CAI6_BIFBR
Alanyl-tRNA synthetase
L3_130_000G1_scaffold_7843_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10841..11077)
DNA (237bp) protein (79aa)
Uncharacterized protein n=6 Tax=Bifidobacterium breve RepID=F6C9R6_BIFBA
Conserved hypothetical, possibly secreted protein
Putative, possibly secreted protein {ECO:0000313|EMBL:AHJ21069.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_130_000G1_scaffold_7843_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11077..11460)
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S2ZLC7_BIFBR
putative, possibly secreted protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75180.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_130_000G1_scaffold_7843_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11543..11710)
DNA (168bp) protein (56aa)
Phosphoglycerate mutase family protein n=4 Tax=Bifidobacterium breve RepID=F6C9R8_BIFBA
Phosphoglycerate mutase family protein
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:ABE95579.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_130_000G1_scaffold_7843_14
unknown

Not on your lists

11752..12195
DNA (444bp) protein (148aa)

This feature has no annotations

L3_130_000G1_scaffold_7843_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12420..12713
DNA (294bp) protein (98aa)
RelB antitoxin n=6 Tax=Bifidobacterium RepID=B7GSA5_BIFLS
relB; Hypothetical protein
RelB antitoxin {ECO:0000313|EMBL:ACJ52685.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_130_000G1_scaffold_7843_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13034..13636)
DNA (603bp) protein (201aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=D4BP70_BIFBR
Hypothetical protein, putative transglutaminase, possible cysteine protease
Uncharacterized protein {ECO:0000313|EMBL:EFE89457.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_130_000G1_scaffold_7843_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13741..14097)
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=B7GSA8_BIFLS
putative membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:ERI87511.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_130_000G1_scaffold_7843_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14187..14672
DNA (486bp) protein (162aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E0E7_BIFBR
Cytidine deaminase {ECO:0000313|EMBL:ERI87512.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_130_000G1_scaffold_7843_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14810..15382
DNA (573bp) protein (191aa)
Peptidase C26 n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CTV9_BIFBR
Peptidase C26 {ECO:0000313|EMBL:ERI87513.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Glutamine amidotransferase, class I
Displaying 19 items

View Taxonomy