ggKbase home page

L3_130_000G1_scaffold_2967

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_2967_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2..1522
DNA (1521bp) protein (507aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00173448};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Proline--tRNA ligase n=3 Tax=Bifidobacterium breve RepID=F9Y2Q7_BIFBU
Prolyl-tRNA synthetase
L3_130_000G1_scaffold_2967_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1785..2459
DNA (675bp) protein (225aa)
Single-strand binding family protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E042_BIFBR
Single-strand binding family protein {ECO:0000313|EMBL:ERI87382.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Single-strand DNA binding protein
L3_130_000G1_scaffold_2967_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2529..3725)
DNA (1197bp) protein (399aa)
Peptidase family M13 n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4R4_BIFBR
Zinc metalloprotease
Peptidase family M13 {ECO:0000313|EMBL:ERI87381.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_130_000G1_scaffold_2967_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3722..4402)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZHA7_BIFBR
Zinc metalloprotease
Uncharacterized protein {ECO:0000313|EMBL:EPD75796.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_130_000G1_scaffold_2967_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4567..5451
DNA (885bp) protein (295aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=U2CS78_BIFBR
putative membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75795.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_130_000G1_scaffold_2967_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5615..6397
DNA (783bp) protein (261aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Methionine aminopeptidase n=5 Tax=Bifidobacterium breve RepID=F6C6F2_BIFBA
Methionine aminopeptidase
L3_130_000G1_scaffold_2967_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6609..7901
DNA (1293bp) protein (431aa)
gltA; Citrate synthase (EC:2.3.3.1)
Citrate synthase n=4 Tax=Bifidobacterium breve RepID=F6C6F1_BIFBA
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_130_000G1_scaffold_2967_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8276..9295)
DNA (1020bp) protein (340aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_02122};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; Tetrahydropicolinate succinylase {ECO:0000256|HAMAP-Rule:MF_02122}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4Q9_BIFBR
L3_130_000G1_scaffold_2967_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9473..13549
DNA (4077bp) protein (1359aa)
Protein, SNF2 family n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CS76_BIFBR
Protein, SNF2 family {ECO:0000313|EMBL:ERI87375.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Helicase
L3_130_000G1_scaffold_2967_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13555..14118)
DNA (564bp) protein (188aa)
Acetyltransferase, GNAT family n=3 Tax=Bifidobacterium breve RepID=D4BR70_BIFBR
Acetyltransferase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFE88715.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_130_000G1_scaffold_2967_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14273..14725
DNA (453bp) protein (151aa)
DNA mismatch endonuclease Vsr n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AHH1_BIFBR
DNA mismatch endonuclease, patch repair protein
DNA mismatch endonuclease, patch repair protein {ECO:0000313|EMBL:AHJ21622.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_130_000G1_scaffold_2967_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14805..15860)
DNA (1056bp) protein (352aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Bifidobacterium breve RepID=U2E035_BIFBR
NAD-dependent oxidoreductase
NAD-dependent oxidoreductase {ECO:0000313|EMBL:AHJ21621.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_130_000G1_scaffold_2967_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15959..17170
DNA (1212bp) protein (404aa)
Aminotransferase (EC:2.6.1.-)
Aminotransferase, class I/II n=4 Tax=Bifidobacterium breve RepID=F6C6E5_BIFBA
Aminotransferase {ECO:0000313|EMBL:AHJ21620.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_130_000G1_scaffold_2967_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17223..18191
DNA (969bp) protein (323aa)
Ppx/GppA phosphatase family protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6E4_BIFBA
Ppx/GppA phosphatase family protein
Ppx/GppA phosphatase family protein {ECO:0000313|EMBL:AEF27606.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_130_000G1_scaffold_2967_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18225..19364)
DNA (1140bp) protein (380aa)
Endonuclease/exonuclease/phosphatase family protein n=2 Tax=Bifidobacterium breve RepID=F6C6E3_BIFBA
putative membrane spanning protein with Endonuclease/Exonuclease/phosphatase family domain
Putative membrane spanning protein with Endonuclease/Exonuclease/phosphatase family domain {ECO:0000313|EMBL:AHJ21618.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Displaying 15 items

View Taxonomy