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L3_130_000G1_scaffold_10

Search features with annotation key words

Displaying items 1-30 of 250 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_10_1
unknown

Not on your lists

comp(326..694)
DNA (369bp) protein (123aa)

This feature has no annotations

L3_130_000G1_scaffold_10_2
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(666..1616)
DNA (951bp) protein (317aa)
Oligopeptide transport ATP-binding protein AmiF n=1 Tax=Clostridium sp. CAG:242 RepID=R6CSF5_9CLOT
Oligopeptide transport ATP-binding protein AmiF {ECO:0000313|EMBL:CDA78555.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L3_130_000G1_scaffold_10_3
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1609..2661)
DNA (1053bp) protein (351aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain n=2 Tax=Lachnospiraceae RepID=S2YD62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88919.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
L3_130_000G1_scaffold_10_4
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2674..3594)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RYV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88920.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_130_000G1_scaffold_10_5
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(3591..4541)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RA58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44755.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_130_000G1_scaffold_10_6
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4629..6647)
DNA (2019bp) protein (673aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CPQ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78673.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
ABC-type oligopeptide transport system, periplasmic component
L3_130_000G1_scaffold_10_7
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6844..8385)
DNA (1542bp) protein (514aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
His Kinase A (Phosphoacceptor) domain./Histidine kinase-DNA gyrase B-and HSP90-like ATPase./HAMP domain n=1 Tax=Clostridium sp. CAG:58 RepID=R6RLX1_9CLOT
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain.
L3_130_000G1_scaffold_10_8
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8385..9062)
DNA (678bp) protein (226aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Clostridium sp. CAG:58 RepID=R6STI0_9CLOT
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDC49907.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_130_000G1_scaffold_10_9
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9459..9722
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6S3K2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49906.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_130_000G1_scaffold_10_10
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9825..11624)
DNA (1800bp) protein (600aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RQD9_9CLOT
Aspartate--tRNA ligase {ECO:0000313|EMBL:CDC49905.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_130_000G1_scaffold_10_11
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11640..12905)
DNA (1266bp) protein (422aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidyl-tRNA synthetase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RX10_9CLOT
Histidyl-tRNA synthetase {ECO:0000313|EMBL:CDC49904.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_130_000G1_scaffold_10_12
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12941..14398)
DNA (1458bp) protein (486aa)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases (EC:1.3.99.22)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases n=1 Tax=Clostridium sp. CAG:81 RepID=R5G129_9CLOT
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases {ECO:0000313|EMBL:CCY09559.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_130_000G1_scaffold_10_13
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14401..15036)
DNA (636bp) protein (212aa)
Zn-dependent hydrolases including glyoxylases n=1 Tax=Clostridium sp. CAG:58 RepID=R6RLW6_9CLOT
Zn-dependent hydrolases including glyoxylases {ECO:0000313|EMBL:CDC49903.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Zn-dependent hydrolases, including glyoxylases
L3_130_000G1_scaffold_10_14
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15107..17386)
DNA (2280bp) protein (760aa)
(p)ppGpp synthetase, RelA/SpoT family (EC:2.7.6.5)
(P)ppGpp synthetase RelA/SpoT family n=1 Tax=Clostridium sp. CAG:58 RepID=R6STH6_9CLOT
(P)ppGpp synthetase RelA/SpoT family {ECO:0000313|EMBL:CDC49902.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_130_000G1_scaffold_10_15
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17620..18795
DNA (1176bp) protein (392aa)
Amidohydrolase n=1 Tax=Clostridium sp. CAG:58 RepID=R6S3J7_9CLOT
Amidohydrolase {ECO:0000313|EMBL:CDC49901.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
amidohydrolase
L3_130_000G1_scaffold_10_16
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18813..20429
DNA (1617bp) protein (539aa)
gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 (EC:2.3.2.2)
Gamma-glutamyltransferase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RQD3_9CLOT
Gamma-glutamyltransferase {ECO:0000313|EMBL:CDC49900.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_130_000G1_scaffold_10_17
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20695..21861)
DNA (1167bp) protein (389aa)
Predicted xylanase/chitin deacetylase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RX06_9CLOT
Predicted xylanase/chitin deacetylase {ECO:0000313|EMBL:CDC49899.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Predicted xylanase/chitin deacetylase
L3_130_000G1_scaffold_10_18
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21858..22409)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RLW2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49898.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
metal dependent phosphohydrolase
L3_130_000G1_scaffold_10_19
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22444..23277)
DNA (834bp) protein (278aa)
Small-conductance mechanosensitive channel n=1 Tax=Clostridium sp. CAG:58 RepID=R6STH2_9CLOT
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:CDC49897.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Small-conductance mechanosensitive channel
L3_130_000G1_scaffold_10_20
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23277..25778)
DNA (2502bp) protein (834aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
glycogen branching enzyme (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Clostridium sp. CAG:58 RepID=R6S3J0_9CLOT
L3_130_000G1_scaffold_10_21
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26008..26670
DNA (663bp) protein (221aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
signal peptidase I . Serine peptidase. MEROPS family S26A (EC:3.4.21.89)
Signal peptidase I . Serine peptidase. MEROPS family S26A n=1 Tax=Clostridium sp. CAG:58 RepID=R6RQC6_9CLOT
L3_130_000G1_scaffold_10_22
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26700..28019
DNA (1320bp) protein (440aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RX01_9CLOT
L3_130_000G1_scaffold_10_23
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28541..29881
DNA (1341bp) protein (447aa)
Branched-chain amino acid transport system II carrier protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RLV8_9CLOT
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:CDC49893.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
brnQ; branched-chain amino acid transport system II carrier protein
L3_130_000G1_scaffold_10_24
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29935..31164)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RZ82_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC50654.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_130_000G1_scaffold_10_25
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31195..31665)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RSL8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC50655.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_130_000G1_scaffold_10_26
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

comp(31662..32126)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N5A9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF08679.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
hypothetical protein
L3_130_000G1_scaffold_10_27
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32388..33854)
DNA (1467bp) protein (489aa)
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RZ90_9CLOT
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_130_000G1_scaffold_10_28
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33956..34495)
DNA (540bp) protein (180aa)
Putative flavoredoxin n=1 Tax=Clostridium sp. CAG:58 RepID=R6S5R8_9CLOT
Putative flavoredoxin {ECO:0000313|EMBL:CDC50666.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
flavoredoxin
L3_130_000G1_scaffold_10_29
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34617..34895)
DNA (279bp) protein (93aa)
Uncharacterized conserved protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6SVN2_9CLOT
Uncharacterized conserved protein {ECO:0000313|EMBL:CDC50667.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_130_000G1_scaffold_10_30
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35034..35939)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RP39_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC50668.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Fe-S oxidoreductase
Displaying items 1-30 of 250 in total

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