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L3_130_000G1_scaffold_21

Search features with annotation key words

Displaying items 1-30 of 211 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_21_1
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(429..602)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO60537.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L3_130_000G1_scaffold_21_2
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1366..2292)
DNA (927bp) protein (309aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU88_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDO60538.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L-rhamnose operon transcriptional activator
L3_130_000G1_scaffold_21_3
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2960..4309
DNA (1350bp) protein (450aa)
ABC transporter, solute-binding protein n=2 Tax=Clostridium RepID=A7VU91_9CLOT
ABC transporter solute-binding protein {ECO:0000313|EMBL:CDC05292.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
extracellular solute-binding protein
L3_130_000G1_scaffold_21_4
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4379..5284
DNA (906bp) protein (302aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=A7VU92_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CDC05291.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
sugar ABC transporter, permease protein
L3_130_000G1_scaffold_21_5
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5303..6151
DNA (849bp) protein (283aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=A7VU93_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CDC05290.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
sugar ABC transporter permease
L3_130_000G1_scaffold_21_6
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6251..7240
DNA (990bp) protein (330aa)
Oxidoreductase NAD-binding domain protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6NAC4_9CLOT
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:CDC05289.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
oxidoreductase domain-containing protein
L3_130_000G1_scaffold_21_7
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7435..9753
DNA (2319bp) protein (773aa)
Uncharacterized protein n=2 Tax=root RepID=R6MZV1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC05288.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L3_130_000G1_scaffold_21_8
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9955..10998
DNA (1044bp) protein (348aa)
sorbitol dehydrogenase (EC:1.1.1.14)
Putative chlorophyll synthesis pathway protein BchC n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU96_9CLOT
Putative chlorophyll synthesis pathway protein BchC {ECO:0000313|EMBL:EDO60546.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L3_130_000G1_scaffold_21_9
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11471..12139
DNA (669bp) protein (223aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VU97_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO60547.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
putative manganese-containing catalase
L3_130_000G1_scaffold_21_10
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12782..14863
DNA (2082bp) protein (694aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Clostridium leptum CAG:27 RepID=R6N2L0_9CLOT
Aspartate--tRNA ligase {ECO:0000313|EMBL:CDC05285.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L3_130_000G1_scaffold_21_11
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14880..16331
DNA (1452bp) protein (484aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Clostridium leptum CAG:27 RepID=R6NAB7_9CLOT
L3_130_000G1_scaffold_21_12
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16333..17757
DNA (1425bp) protein (475aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Clostridium leptum CAG:27 RepID=R6MZU8_9CLOT
L3_130_000G1_scaffold_21_13
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18012..20210
DNA (2199bp) protein (733aa)
Glycosyltransferase group 2 family protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6P5Q5_9CLOT
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDC05282.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L3_130_000G1_scaffold_21_14
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20348..22504)
DNA (2157bp) protein (719aa)
Ferrous iron transport protein B n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUA6_9CLOT
Ferrous iron transport protein B {ECO:0000313|EMBL:EDO60556.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
HSR1-like GTP-binding protein
L3_130_000G1_scaffold_21_15
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22521..22763)
DNA (243bp) protein (81aa)
FeoA domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUA7_9CLOT
FeoA domain protein {ECO:0000313|EMBL:EDO60557.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Fe2+ transporter A
L3_130_000G1_scaffold_21_16
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23191..23727)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUA9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO60559.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L3_130_000G1_scaffold_21_17
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23751..25097)
DNA (1347bp) protein (449aa)
Putative sporulation integral membrane protein YlbJ n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUB1_9CLOT
Putative sporulation integral membrane protein YlbJ {ECO:0000313|EMBL:EDO60561.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
putative membrane protein
L3_130_000G1_scaffold_21_18
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25588..25893
DNA (306bp) protein (102aa)
Putative sporulation protein YqfC n=2 Tax=Clostridium RepID=A7VUB3_9CLOT
Putative sporulation protein YqfC {ECO:0000313|EMBL:CDC05861.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L3_130_000G1_scaffold_21_19
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26150..27337
DNA (1188bp) protein (396aa)
Sporulation protein YqfD n=2 Tax=Clostridium RepID=A7VUB4_9CLOT
Sporulation protein YqfD {ECO:0000313|EMBL:CDC05860.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
sporulation protein YqfD
L3_130_000G1_scaffold_21_20
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27617..28582
DNA (966bp) protein (322aa)
KH domain protein n=2 Tax=Clostridium RepID=A7VUB6_9CLOT
KH domain protein {ECO:0000313|EMBL:EDO60566.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Phosphate starvation-inducible protein PhoH, predicted ATPase
L3_130_000G1_scaffold_21_21
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28579..29088
DNA (510bp) protein (170aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Endoribonuclease YbeY n=2 Tax=Clostridium RepID=A7VUB7_9CLOT
conserved hypothetical protein TIGR00043
L3_130_000G1_scaffold_21_22
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29162..29587
DNA (426bp) protein (142aa)
Prokaryotic diacylglycerol kinase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUB8_9CLOT
Prokaryotic diacylglycerol kinase {ECO:0000313|EMBL:EDO60568.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
diacylglycerol kinase
L3_130_000G1_scaffold_21_23
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29592..30509
DNA (918bp) protein (306aa)
GTPase Era n=2 Tax=Clostridium RepID=A7VUB9_9CLOT
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
GTP-binding protein Era
L3_130_000G1_scaffold_21_24
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30714..31478
DNA (765bp) protein (255aa)
DNA repair protein RecO n=2 Tax=Clostridium RepID=A7VUC1_9CLOT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
DNA repair protein RecO
L3_130_000G1_scaffold_21_25
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31830..32177
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VUC2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC05851.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L3_130_000G1_scaffold_21_26
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32368..34737
DNA (2370bp) protein (790aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Endonuclease MutS2 n=1 Tax=Clostridium leptum CAG:27 RepID=R6NC12_9CLOT
MutS2 family protein
L3_130_000G1_scaffold_21_27
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34972..35679
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUC5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO60575.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L3_130_000G1_scaffold_21_28
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35826..36188
DNA (363bp) protein (121aa)
Helix-turn-helix protein, YlxM/p13 family n=2 Tax=Clostridium RepID=A7VUC6_9CLOT
UPF0122 protein BN578_01169 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
helix-turn-helix protein YlxM/p13 family protein
L3_130_000G1_scaffold_21_29
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


36251..37621
DNA (1371bp) protein (457aa)
Signal recognition particle protein n=2 Tax=Clostridium RepID=A7VUC7_9CLOT
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
signal recognition particle subunit FFH/SRP54 (srp54)
L3_130_000G1_scaffold_21_30
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


37695..37937
DNA (243bp) protein (81aa)
30S ribosomal protein S16 n=2 Tax=Clostridium RepID=A7VUC8_9CLOT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
30S ribosomal protein S16
Displaying items 1-30 of 211 in total

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