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L3_130_000G1_scaffold_40

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Displaying items 1-30 of 326 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_40_1
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3..134
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=T5LQT1_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA {ECO:0000313|EMBL:EDS19112.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Lycopene beta/epsilon cyclase family protein
L3_130_000G1_scaffold_40_2
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(185..1744)
DNA (1560bp) protein (520aa)
Chloride transporter, ClC family n=4 Tax=Erysipelotrichaceae RepID=B0N3U1_9FIRM
Chloride transporter, ClC family {ECO:0000313|EMBL:EDS19113.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Group I intron
L3_130_000G1_scaffold_40_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1870..2325
DNA (456bp) protein (152aa)
Transcriptional regulator, MarR family n=5 Tax=Erysipelotrichaceae RepID=B0N3U2_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CCZ36634.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hpr; HTH-type transcriptional regulator Hpr
L3_130_000G1_scaffold_40_4
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2499..3128)
DNA (630bp) protein (210aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RLK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91597.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
comFC; putative competence protein ComFC
L3_130_000G1_scaffold_40_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3095..4198)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=H1AGF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36632.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein)
L3_130_000G1_scaffold_40_6
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4469..4666
DNA (198bp) protein (66aa)
Cold-shock DNA-binding domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N3U5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47925.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
cold-shock DNA-binding domain-containing protein
L3_130_000G1_scaffold_40_7
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4766..7399
DNA (2634bp) protein (878aa)
Protein translocase subunit SecA n=5 Tax=Erysipelotrichaceae RepID=B0N3U6_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
secA1; Protein translocase subunit SecA 1
L3_130_000G1_scaffold_40_8
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7399..8496
DNA (1098bp) protein (366aa)
Peptide chain release factor 2 n=5 Tax=Erysipelotrichaceae RepID=B0N3U7_9FIRM
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
prfB; peptide chain release factor 2, programmed frameshift
L3_130_000G1_scaffold_40_9
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8510..9367
DNA (858bp) protein (286aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=G9R1H6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36627.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_130_000G1_scaffold_40_10
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9412..9627)
DNA (216bp) protein (72aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N3U9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36626.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_130_000G1_scaffold_40_11
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9814..10497
DNA (684bp) protein (228aa)
Cell division ATP-binding protein FtsE n=4 Tax=Erysipelotrichaceae RepID=B0N3V0_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EHQ47930.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
cell division ATP-binding protein FtsE
L3_130_000G1_scaffold_40_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10497..11408
DNA (912bp) protein (304aa)
Cell division protein FtsX n=2 Tax=Erysipelotrichaceae RepID=B0N3V1_9FIRM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
ftsX; cell division protein
L3_130_000G1_scaffold_40_13
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11448..12137
DNA (690bp) protein (230aa)
Acetyltransferase, GNAT family n=3 Tax=Erysipelotrichaceae RepID=B0N3V2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91606.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
GCN5-like N-acetyltransferase
L3_130_000G1_scaffold_40_14
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12153..13523
DNA (1371bp) protein (457aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RLK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47933.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
transglutaminase
L3_130_000G1_scaffold_40_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13586..13837
DNA (252bp) protein (84aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N3V4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36622.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_130_000G1_scaffold_40_16
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13979..15736)
DNA (1758bp) protein (586aa)
ABC transporter, ATP-binding protein n=5 Tax=Erysipelotrichaceae RepID=B0N3V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47935.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_130_000G1_scaffold_40_17
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15854..16684
DNA (831bp) protein (277aa)
Transcriptional regulator, MerR family n=4 Tax=Erysipelotrichaceae RepID=B0N3V6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47936.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L3_130_000G1_scaffold_40_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16757..17794
DNA (1038bp) protein (346aa)
Dihydrodipicolinate reductase domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N3V7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91611.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
dihydrodipicolinate reductase
L3_130_000G1_scaffold_40_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17900..18217
DNA (318bp) protein (106aa)
Transcriptional regulator, PadR family n=5 Tax=Erysipelotrichaceae RepID=B0N3V8_9FIRM
Transcriptional regulator PadR family {ECO:0000313|EMBL:CCZ36618.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
putative transcriptional regulator
L3_130_000G1_scaffold_40_20
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18407..19699
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N3V9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19131.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_130_000G1_scaffold_40_21
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20038..20172
DNA (135bp) protein (45aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N3W0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36616.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_130_000G1_scaffold_40_22
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20169..20450
DNA (282bp) protein (94aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N3W1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36615.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_130_000G1_scaffold_40_23
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20414..20902
DNA (489bp) protein (163aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RLL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47942.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
manganese containing catalase
L3_130_000G1_scaffold_40_24
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21645..23240
DNA (1596bp) protein (532aa)
ABC transporter, ATP-binding protein n=4 Tax=Erysipelotrichaceae RepID=B0N3W5_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS19137.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
ABC transporter ATPase
L3_130_000G1_scaffold_40_25
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23304..24065
DNA (762bp) protein (254aa)
Nitroreductase family protein n=5 Tax=Erysipelotrichaceae RepID=B0N3W6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36611.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
nitroreductase
L3_130_000G1_scaffold_40_26
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24193..24621
DNA (429bp) protein (143aa)
Transcriptional regulator, MarR family n=5 Tax=Erysipelotrichaceae RepID=B0N3W7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36610.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Transcriptional regulators
L3_130_000G1_scaffold_40_27
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24677..26410
DNA (1734bp) protein (578aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
ABC transporter, ATP-binding protein n=5 Tax=Erysipelotrichaceae RepID=B0N3W8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47946.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_130_000G1_scaffold_40_28
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26427..28265
DNA (1839bp) protein (613aa)
ABC transporter, ATP-binding protein n=3 Tax=Erysipelotrichaceae RepID=B0N3W9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91621.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
ABC transporter related protein
L3_130_000G1_scaffold_40_29
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28293..28571)
DNA (279bp) protein (93aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N3X0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31736.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein predicted by Glimmer/Critica
L3_130_000G1_scaffold_40_30
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28830..29615
DNA (786bp) protein (262aa)
HAD hydrolase, family IIB n=4 Tax=Erysipelotrichaceae RepID=B0N3X1_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CCZ31737.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
HAD-superfamily hydrolase, subfamily IIB
Displaying items 1-30 of 326 in total

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