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L3_130_000G1_scaffold_41

Search features with annotation key words

Displaying items 1-30 of 210 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_41_1
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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958..2358
DNA (1401bp) protein (467aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
asnS; Asparagine--tRNA ligase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IBZ6_9FIRM
L3_130_000G1_scaffold_41_2
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2431..2976
DNA (546bp) protein (182aa)
Acetyltransferase, GNAT family n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LE01_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EET61205.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
GNAT family acetyltransferase
L3_130_000G1_scaffold_41_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2991..3965
DNA (975bp) protein (325aa)
Peptidase family T4 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL71_9FIRM
Peptidase family T4 {ECO:0000313|EMBL:EFB76729.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L-aminopeptidase/D-esterase
L3_130_000G1_scaffold_41_4
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4160..4420)
DNA (261bp) protein (87aa)
Coat F domain n=1 Tax=Roseburia sp. CAG:303 RepID=R7IRJ7_9FIRM
Coat F domain {ECO:0000313|EMBL:CDE53938.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
Coat F domain.
L3_130_000G1_scaffold_41_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4432..4617)
DNA (186bp) protein (62aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GA13_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL11537.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_130_000G1_scaffold_41_6
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4829..5428
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AJ63_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ26340.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Predicted HD superfamily hydrolase involved in NAD metabolism
L3_130_000G1_scaffold_41_7
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5512..8166)
DNA (2655bp) protein (885aa)
copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SLL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC56286.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
L3_130_000G1_scaffold_41_8
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8369..9397)
DNA (1029bp) protein (343aa)
Transcriptional regulator, AraC family n=2 Tax=Oscillibacter RepID=U2QJ99_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERK56556.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative AraC family transcriptional regulator
L3_130_000G1_scaffold_41_9
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9398..9781)
DNA (384bp) protein (128aa)
Transcriptional regulator, ArsR family n=2 Tax=Oscillibacter RepID=U2S168_9FIRM
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ERK56557.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
transcriptional regulator, ArsR family
L3_130_000G1_scaffold_41_10
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10014..10232
DNA (219bp) protein (73aa)
Heavy-metal-associated domain n=1 Tax=Blautia sp. CAG:257 RepID=R5XAV3_9FIRM
Heavy-metal-associated domain {ECO:0000313|EMBL:CDA05511.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
Heavy-metal-associated domain.
L3_130_000G1_scaffold_41_11
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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10334..12220
DNA (1887bp) protein (629aa)
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase (EC:3.6.3.5)
Cadmium-exporting ATPase n=2 Tax=Oscillibacter RepID=U2QK40_9FIRM
Cadmium-exporting ATPase {ECO:0000313|EMBL:ERK56559.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_130_000G1_scaffold_41_12
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12248..12556
DNA (309bp) protein (103aa)
O-6-methylguanine DNA methyltransferase n=1 Tax=Clostridium intestinale URNW RepID=U2PS16_9CLOT
O-6-methylguanine DNA methyltransferase {ECO:0000313|EMBL:ERK29250.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
O-6-methylguanine DNA methyltransferase
L3_130_000G1_scaffold_41_13
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12790..13839
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BBM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82333.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_130_000G1_scaffold_41_14
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13903..14550)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03737.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_130_000G1_scaffold_41_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14547..15410)
DNA (864bp) protein (288aa)
ABC transporter, ATP-binding protein n=5 Tax=Clostridiales RepID=A5KJZ3_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDK25646.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
ABC transporter
L3_130_000G1_scaffold_41_16
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15414..15857)
DNA (444bp) protein (148aa)
Transcriptional regulator, GntR family n=5 Tax=Clostridiales RepID=A5KJZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG89138.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
GntR family transcriptional regulator
L3_130_000G1_scaffold_41_17
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15860..16591)
DNA (732bp) protein (244aa)
ABC-2 type transporter n=5 Tax=Clostridiales RepID=A5KJZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV20570.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_130_000G1_scaffold_41_18
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16588..17439)
DNA (852bp) protein (284aa)
ABC transporter ATP-binding protein n=5 Tax=Clostridiales RepID=E5XDM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG89136.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
ABC transporter ATP-binding protein
L3_130_000G1_scaffold_41_19
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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17616..18893
DNA (1278bp) protein (426aa)
Alpha-glucosidase n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6WCU5_9FIRM
Alpha-glucosidase {ECO:0000313|EMBL:CDC92002.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
gh31D; glycoside hydrolase 31
L3_130_000G1_scaffold_41_20
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18890..19615
DNA (726bp) protein (242aa)
Alpha-glucosidases, family 31 of glycosyl hydrolases (EC:3.2.1.20)
Glycosyl hydrolase, family 31 n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BE53_9CLOT
Glycosyl hydrolase, family 31 {ECO:0000313|EMBL:ERI70470.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L3_130_000G1_scaffold_41_21
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19627..20271
DNA (645bp) protein (215aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Predicted EndoIII-related endonuclease (EC:4.2.99.18)
Endonuclease III n=2 Tax=Clostridium RepID=D4CDD5_9CLOT
L3_130_000G1_scaffold_41_22
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20287..21228
DNA (942bp) protein (314aa)
Predicted membrane protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND74_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDF10053.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_130_000G1_scaffold_41_23
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21247..22191
DNA (945bp) protein (315aa)
Putative membrane protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BDB1_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EEG88457.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
L3_130_000G1_scaffold_41_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22535..23608
DNA (1074bp) protein (358aa)
NitT/TauT family ABC transporter permease n=8 Tax=Clostridium clostridioforme RepID=N9V9E6_9CLOT
NitT/TauT family ABC transporter permease {ECO:0000313|EMBL:ENZ61368.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
ssuC2; aliphatic sulfonates ABC transporter permease SsuC
L3_130_000G1_scaffold_41_25
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23605..24381
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JNF2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64348.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L3_130_000G1_scaffold_41_26
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24384..25610
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9WUA9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY81910.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L3_130_000G1_scaffold_41_27
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25824..26186
DNA (363bp) protein (121aa)
Heavy metal-associated domain protein n=2 Tax=Coprococcus RepID=C0BB95_9FIRM
Heavy metal-associated domain protein {ECO:0000313|EMBL:CDB84322.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Copper chaperone
L3_130_000G1_scaffold_41_28
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26460..27662
DNA (1203bp) protein (401aa)
SAM-dependent methyltransferase (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:253 RepID=R6MSR2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB88872.1}; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:253.;"
L3_130_000G1_scaffold_41_29
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27676..27897
DNA (222bp) protein (74aa)
Aldose 1-epimerase n=1 Tax=Coprococcus comes CAG:19 RepID=R6MJM1_9FIRM
Aldose 1-epimerase {ECO:0000313|EMBL:EEG87872.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Aldose 1-epimerase
L3_130_000G1_scaffold_41_30
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27860..28246
DNA (387bp) protein (129aa)
Aldose 1-epimerase n=1 Tax=Roseburia sp. CAG:100 RepID=R7R6V8_9FIRM
Aldose 1-epimerase {ECO:0000313|EMBL:CDF46459.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
aldose 1-epimerase
Displaying items 1-30 of 210 in total

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