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L3_130_000G1_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 201 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_42_1
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..324)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Legionella tunisiensis RepID=UPI00030A22B9
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CEG58036.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
L3_130_000G1_scaffold_42_2
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(501..1145)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Burkholderia glumae RepID=UPI0002FA0AE5
Tax=CG_Alphaprot_01
L3_130_000G1_scaffold_42_3
unknown

Not on your lists

comp(1453..2679)
DNA (1227bp) protein (409aa)

This feature has no annotations

L3_130_000G1_scaffold_42_4
R_Gammaproteobacteria_35_23, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2780..4009)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8HZA8_PSEAI
IcmE/DotG protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_35_23_curated
L3_130_000G1_scaffold_42_5
R_Gammaproteobacteria_41_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4039..5169)
DNA (1131bp) protein (377aa)
IcmK id=2031277 bin=GWE2_Gammaproteobacteria_37_16 species=Coxiella burnetii genus=Coxiella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Gammaproteobacteria_37_16 organism_group=Gammaproteobacteria organism_desc=Looks good, but small
icmK_dotH; Component of the Dot/Icm secretion system
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_41_15_curated
L3_130_000G1_scaffold_42_6
Rickettsiella grylli, Rickettsiella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5345..6091)
DNA (747bp) protein (249aa)
IcmL protein n=1 Tax=Rickettsiella grylli RepID=A8PMY8_9COXI
IcmL protein {ECO:0000313|EMBL:EDP45723.1}; TaxID=59196 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Coxiellaceae; Rickettsiella.;" source="Rickettsiella grylli.;"
dotI; hypothetical protein
L3_130_000G1_scaffold_42_7
R_Gammaproteobacteria_41_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6105..6761)
DNA (657bp) protein (219aa)
Uncharacterized protein n=3 Tax=Legionella longbeachae RepID=D3HLA1_LEGLN
dotI; hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_41_15_curated
L3_130_000G1_scaffold_42_8
unknown

Not on your lists

comp(6764..7165)
DNA (402bp) protein (134aa)

This feature has no annotations

L3_130_000G1_scaffold_42_9
unknown

Not on your lists

comp(7180..7770)
DNA (591bp) protein (197aa)

This feature has no annotations

L3_130_000G1_scaffold_42_10
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7901..11473)
DNA (3573bp) protein (1191aa)
hypothetical protein n=1 Tax=Kangiella aquimarina RepID=UPI000371B535
CheA signal transduction histidine kinase
CheA signal transduction histidine kinase {ECO:0000313|EMBL:ADE13161.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
L3_130_000G1_scaffold_42_11
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11520..15245)
DNA (3726bp) protein (1242aa)
composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein (EC:3.1.1.61)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035DBE96
Uncharacterized protein {ECO:0000313|EMBL:GAO34822.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
L3_130_000G1_scaffold_42_12
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15365..17392)
DNA (2028bp) protein (676aa)
chemotaxis protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E602F0
methyl-accepting chemotaxis protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
L3_130_000G1_scaffold_42_13
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17407..19551)
DNA (2145bp) protein (715aa)
chemotaxis sensory transducer; K02660 twitching motility protein PilJ id=12496345 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
chemotaxis sensory transducer
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
L3_130_000G1_scaffold_42_14
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19600..20181)
DNA (582bp) protein (194aa)
CheW protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GHR5_NITSI
pilI; twitching motility protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
L3_130_000G1_scaffold_42_15
Cyanothece sp. ATCC 51142, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(20187..20591)
DNA (405bp) protein (135aa)
Two-component response regulator n=2 Tax=Cyanothece RepID=B1WVA1_CYAA5
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:ACB53891.1}; TaxID=43989 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain ATCC 51142).;"
L3_130_000G1_scaffold_42_16
Acinetobacter nectaris, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20604..21005)
DNA (402bp) protein (134aa)
pilus response regulator PilG n=1 Tax=Thioalkalivibrio RepID=UPI0003752AA3
Protein pilG {ECO:0000313|EMBL:ESK38129.1}; TaxID=1392540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter nectaris CIP 110549.;"
hypothetical protein
L3_130_000G1_scaffold_42_17
unknown

Not on your lists

21336..22352
DNA (1017bp) protein (339aa)

This feature has no annotations

L3_130_000G1_scaffold_42_18
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22380..24305
DNA (1926bp) protein (642aa)
Toprim domain-containing protein n=2 Tax=Nitrosococcus oceani RepID=Q3JF01_NITOC
TOPRIM domain-containing protein
Topoisomerase {ECO:0000313|EMBL:KFI20954.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
L3_130_000G1_scaffold_42_19
unknown

Not on your lists

comp(24382..25404)
DNA (1023bp) protein (341aa)

This feature has no annotations

L3_130_000G1_scaffold_42_20
Piscirickettsia salmonis, Piscirickettsia, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25495..26535
DNA (1041bp) protein (347aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1227812 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Piscirickettsia.;" source="Piscirickettsia salmonis LF-89 = ATCC VR-1361.;"
polI; DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Piscirickettsia salmonis LF-89 = ATCC VR-1361 RepID=U4TAN4_PISSA
L3_130_000G1_scaffold_42_21
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26732..28903
DNA (2172bp) protein (724aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=626418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae (strain BGR1).;"
DNA topoisomerase n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5A9D2_BURGB
DNA topoisomerase III
L3_130_000G1_scaffold_42_22
unknown

Not on your lists

29001..29390
DNA (390bp) protein (130aa)

This feature has no annotations

L3_130_000G1_scaffold_42_23
unknown

Not on your lists

29368..29562
DNA (195bp) protein (65aa)

This feature has no annotations

L3_130_000G1_scaffold_42_24
unknown

Not on your lists

comp(29590..31968)
DNA (2379bp) protein (793aa)

This feature has no annotations

L3_130_000G1_scaffold_42_25
Prochlorococcus marinus, Prochlorococcus, Prochlorales, Cyanobacteria, Bacteria

Not on your lists

comp(32060..32905)
DNA (846bp) protein (282aa)
Adenylate cyclase {ECO:0000313|EMBL:ABX08103.1}; EC=4.6.1.1 {ECO:0000313|EMBL:ABX08103.1};; TaxID=93059 species="Bacteria; Cyanobacteria; Prochlorales; Prochlorococcaceae; Prochlorococcus.;" source="Prochlorococcus marinus (strain MIT 9211).;"
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI000369DF59
hypothetical protein
L3_130_000G1_scaffold_42_26
unknown

Not on your lists

comp(32916..35192)
DNA (2277bp) protein (759aa)

This feature has no annotations

L3_130_000G1_scaffold_42_27
Pseudomonas sp. BRH_c35, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35284..39708)
DNA (4425bp) protein (1475aa)
Uncharacterized protein n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9QVC1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KJS29259.1}; TaxID=1629711 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. BRH_c35.;"
helicase domain protein
L3_130_000G1_scaffold_42_28
unknown

Not on your lists

comp(39785..41266)
DNA (1482bp) protein (494aa)

This feature has no annotations

L3_130_000G1_scaffold_42_29
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41537..43333)
DNA (1797bp) protein (599aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI00036C6034
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
L3_130_000G1_scaffold_42_30
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43544..45424)
DNA (1881bp) protein (627aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI00035C9193
Tax=BJP_IG2102_Gammaproteobacteria_62_140
Displaying items 1-30 of 201 in total

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