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L3_130_000G1_scaffold_96

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Displaying items 1-30 of 135 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_96_1
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..248)
DNA (246bp) protein (82aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWH2_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDO60119.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
N-acetyltransferase GCN5
L3_130_000G1_scaffold_96_2
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(484..867)
DNA (384bp) protein (128aa)
50S ribosomal protein L7/L12 n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWH1_9CLOT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
50S ribosomal protein L7/L12
L3_130_000G1_scaffold_96_3
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(903..1433)
DNA (531bp) protein (177aa)
50S ribosomal protein L10 n=1 Tax=Clostridium leptum CAG:27 RepID=R6N7J9_9CLOT
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
50S ribosomal protein L10
L3_130_000G1_scaffold_96_4
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1650..2345)
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWG8_9CLOT
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
LSU ribosomal protein L1P
L3_130_000G1_scaffold_96_5
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2405..2830)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=2 Tax=Clostridium RepID=A7VWG7_9CLOT
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
LSU ribosomal protein L11P
L3_130_000G1_scaffold_96_6
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2946..3467)
DNA (522bp) protein (174aa)
Transcription termination/antitermination protein NusG n=2 Tax=Clostridium RepID=A7VWG6_9CLOT
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
NusG antitermination factor
L3_130_000G1_scaffold_96_7
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3487..3711)
DNA (225bp) protein (75aa)
Protein translocase subunit SecE n=2 Tax=Clostridium RepID=A7VWG5_9CLOT
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
preprotein translocase, SecE subunit, bacterial
L3_130_000G1_scaffold_96_8
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3732..3881)
DNA (150bp) protein (50aa)
Ribosomal protein L33 n=2 Tax=Clostridium RepID=A7VWG4_9CLOT
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L3_130_000G1_scaffold_96_9
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4033..4833)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N012_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC04375.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L3_130_000G1_scaffold_96_10
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5034..6125
DNA (1092bp) protein (364aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
ddl; D-alanine-D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Clostridium leptum CAG:27 RepID=R6NDT4_9CLOT
L3_130_000G1_scaffold_96_11
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6125..6940
DNA (816bp) protein (272aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=2 Tax=Clostridium RepID=A7VWG1_9CLOT
L3_130_000G1_scaffold_96_12
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6965..7402
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VWG0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO60107.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L3_130_000G1_scaffold_96_13
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7421..9112
DNA (1692bp) protein (564aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
argS; Arginine-tRNA ligase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Clostridium leptum CAG:27 RepID=R6N7L3_9CLOT
L3_130_000G1_scaffold_96_14
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9218..10444
DNA (1227bp) protein (409aa)
Homocysteine S-methyltransferase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWF8_9CLOT
Homocysteine S-methyltransferase {ECO:0000313|EMBL:EDO60105.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L3_130_000G1_scaffold_96_15
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10929..12971)
DNA (2043bp) protein (681aa)
Histidine kinase A domain protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N038_9CLOT
Histidine kinase A domain protein {ECO:0000313|EMBL:CDC04395.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
two-component sensor histidine kinase
L3_130_000G1_scaffold_96_16
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12940..13644)
DNA (705bp) protein (235aa)
Response regulator receiver domain protein n=2 Tax=Clostridium RepID=A7VWF5_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:CDC04396.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_130_000G1_scaffold_96_17
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13738..14010)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWF4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO60101.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L3_130_000G1_scaffold_96_18
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14015..14893)
DNA (879bp) protein (293aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Clostridium RepID=R6MXC6_9CLOT
L3_130_000G1_scaffold_96_19
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15101..15589
DNA (489bp) protein (163aa)
Deoxycytidylate deaminase (EC:3.5.4.12)
Cytidine and deoxycytidylate deaminase zinc-binding region n=2 Tax=Clostridium RepID=A7VWF2_9CLOT
Cytidine and deoxycytidylate deaminase zinc-binding region {ECO:0000313|EMBL:CDC04399.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L3_130_000G1_scaffold_96_20
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15615..17828
DNA (2214bp) protein (738aa)
Formate C-acetyltransferase n=1 Tax=Clostridium leptum CAG:27 RepID=R6N045_9CLOT
Formate C-acetyltransferase {ECO:0000313|EMBL:CDC04400.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
formate acetyltransferase 1
L3_130_000G1_scaffold_96_21
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17984..18721
DNA (738bp) protein (246aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Pyruvate formate-lyase 1-activating enzyme n=2 Tax=Clostridium RepID=A7VWF0_9CLOT
pyruvate formate-lyase 1-activating enzyme
L3_130_000G1_scaffold_96_22
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18876..19946)
DNA (1071bp) protein (357aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Clostridium leptum CAG:27 RepID=R6P371_9CLOT
L3_130_000G1_scaffold_96_23
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20035..20748)
DNA (714bp) protein (238aa)
Fructose-2,6-bisphosphatase (EC:3.1.3.73 5.4.2.1)
Phosphoglycerate mutase family protein n=2 Tax=Clostridium RepID=A7VWE8_9CLOT
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:CDC04403.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L3_130_000G1_scaffold_96_24
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20898..21608
DNA (711bp) protein (237aa)
DNA-binding helix-turn-helix protein n=2 Tax=Clostridium RepID=A7VWE7_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDO60094.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L3_130_000G1_scaffold_96_25
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21815..23506)
DNA (1692bp) protein (564aa)
PASTA domain protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N053_9CLOT
PASTA domain protein {ECO:0000313|EMBL:CDC04405.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L3_130_000G1_scaffold_96_26
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23513..24259)
DNA (747bp) protein (249aa)
Probable transcriptional regulatory protein BN578_02375 n=1 Tax=Clostridium leptum CAG:27 RepID=R6NDW2_9CLOT
Probable transcriptional regulatory protein BN578_02375 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
conserved hypothetical protein TIGR01033
L3_130_000G1_scaffold_96_27
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24320..24892)
DNA (573bp) protein (191aa)
Iron-sulfur flavoprotein n=1 Tax=Clostridium leptum CAG:27 RepID=R6P377_9CLOT
Iron-sulfur flavoprotein {ECO:0000313|EMBL:CDC04407.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
putative NADPH-dependent fmn reductase
L3_130_000G1_scaffold_96_28
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25581..26171
DNA (591bp) protein (197aa)
Methyltransferase domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWE2_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:EDO60089.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_130_000G1_scaffold_96_29
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26440..27423
DNA (984bp) protein (328aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VWE1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC04409.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L3_130_000G1_scaffold_96_30
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27506..28825
DNA (1320bp) protein (440aa)
Putative DNA modification/repair radical SAM protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N060_9CLOT
Putative DNA modification/repair radical SAM protein {ECO:0000313|EMBL:CDC04410.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Biotin synthase related domain containing protein
Displaying items 1-30 of 135 in total

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