ggKbase home page

L3_130_000G1_scaffold_172

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_172_1
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

212..1045
DNA (834bp) protein (278aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D532_9CLOT
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EEG53554.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
aldo/keto reductase oxidoreductase
L3_130_000G1_scaffold_172_2
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1078..1689
DNA (612bp) protein (204aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D533_9CLOT
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EEG53555.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
NAD(P)-dependent oxidoreductase
L3_130_000G1_scaffold_172_3
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1895..2374)
DNA (480bp) protein (160aa)
methyltransferase n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036EA7A9
Methyltransferase, YaeB family {ECO:0000313|EMBL:EJF40605.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_130_000G1_scaffold_172_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2585..3658
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BPQ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI80129.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_130_000G1_scaffold_172_5
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3791..4468
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BNL1100 RepID=H2J9B8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY67648.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
L3_130_000G1_scaffold_172_6
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4449..5462
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BNL1100 RepID=H2J9B7_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY67647.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
L3_130_000G1_scaffold_172_7
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5553..6248)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Desulfitobacterium hafniense RepID=UPI00035D2620
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA68854.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
L3_130_000G1_scaffold_172_8
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6627..7589
DNA (963bp) protein (321aa)
Uncharacterized protein n=5 Tax=Clostridium RepID=A8S5D4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ41746.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L3_130_000G1_scaffold_172_9
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7623..8054
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VE85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58088.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_130_000G1_scaffold_172_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8195..9097
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9ZBR2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17919.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_130_000G1_scaffold_172_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9115..9432
DNA (318bp) protein (106aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9VW04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ62453.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_130_000G1_scaffold_172_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9608..10000
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9ZCX5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17922.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_130_000G1_scaffold_172_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10063..10320
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9Z100_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17923.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_130_000G1_scaffold_172_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10317..10910
DNA (594bp) protein (198aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9VWJ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ62457.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_130_000G1_scaffold_172_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11006..11770
DNA (765bp) protein (255aa)
Filamentation induced by cAMP protein fic n=9 Tax=Clostridium RepID=N9WRT5_9CLOT
Filamentation induced by cAMP protein fic {ECO:0000313|EMBL:ENZ60425.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_130_000G1_scaffold_172_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11806..13668
DNA (1863bp) protein (621aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9XRC8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17926.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_130_000G1_scaffold_172_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13740..14774
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9ZCX9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17927.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_130_000G1_scaffold_172_18
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14794..15303
DNA (510bp) protein (170aa)
AIG2-like family protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CCD4_9CLOT
AIG2-like family protein {ECO:0000313|EMBL:EFE12880.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
BtrG-like protein
L3_130_000G1_scaffold_172_19
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15327..15668)
DNA (342bp) protein (114aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9VWJ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25645.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Helix-turn-helix.
L3_130_000G1_scaffold_172_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15805..16347
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9XRT3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17930.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_130_000G1_scaffold_172_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16400..17422
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9XRD3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17931.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_130_000G1_scaffold_172_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17462..18073
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9Z107_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17933.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_130_000G1_scaffold_172_23
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18087..18338
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CCC9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE12875.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L3_130_000G1_scaffold_172_24
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18998..19429
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CHE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI89934.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
L3_130_000G1_scaffold_172_25
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19726..21240
DNA (1515bp) protein (505aa)
Eco57I restriction endonuclease family protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B7Y8_9FIRM
Eco57I restriction endonuclease family protein {ECO:0000313|EMBL:CDA55161.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Predicted O-methyltransferase
L3_130_000G1_scaffold_172_26
Geobacillus sp. G1w1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21197..22117
DNA (921bp) protein (307aa)
BsuBI/PstI restriction endonuclease C-terminus. (EC:3.1.21.4)
BsuBI/PstI restriction endonuclease C-terminus n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6ATB7_9FIRM
Restriction endonuclease BsuBI {ECO:0000313|EMBL:KFX35499.1}; TaxID=1430331 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. G1w1.;"
L3_130_000G1_scaffold_172_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22275..25106
DNA (2832bp) protein (944aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9WEA3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ62469.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_130_000G1_scaffold_172_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25121..26557
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9Z111_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17938.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_130_000G1_scaffold_172_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26886..27047
DNA (162bp) protein (54aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZY1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99580.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_130_000G1_scaffold_172_30
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27450..29267
DNA (1818bp) protein (606aa)
TraG-related protein n=3 Tax=Clostridium RepID=A5N3Z2_CLOK5
TraG-like protein
TraG-related protein {ECO:0000313|EMBL:EDK35838.1}; TaxID=431943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680).;"
Displaying items 1-30 of 106 in total

View Taxonomy