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L3_130_000G1_scaffold_242

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Displaying items 1-30 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_242_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

309..848
DNA (540bp) protein (180aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JED8_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EES76559.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L3_130_000G1_scaffold_242_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

845..1639
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JED9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76560.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_130_000G1_scaffold_242_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1658..1972)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76561.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_130_000G1_scaffold_242_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2807..4501
DNA (1695bp) protein (565aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79325.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Carbon starvation protein, predicted membrane protein
L3_130_000G1_scaffold_242_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4710..5621)
DNA (912bp) protein (304aa)
nitrite and sulfite reductase subunit n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FED59F
Uncharacterized protein {ECO:0000313|EMBL:EES76565.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits
L3_130_000G1_scaffold_242_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5874..6719
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76566.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_130_000G1_scaffold_242_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7592..9313
DNA (1722bp) protein (574aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76567.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Subtilisin-like serine proteases
L3_130_000G1_scaffold_242_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9883..10509)
DNA (627bp) protein (209aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78231.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_130_000G1_scaffold_242_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10568..11362)
DNA (795bp) protein (265aa)
ABC transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLN8_9FIRM
ABC transporter {ECO:0000313|EMBL:CDD78233.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type multidrug transport system, ATPase component
L3_130_000G1_scaffold_242_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11374..11745)
DNA (372bp) protein (124aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=C6JEF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76571.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcriptional regulator, GntR family
L3_130_000G1_scaffold_242_11
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12307..12858)
DNA (552bp) protein (184aa)
Helix-turn-helix n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LQH8_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBL23036.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_130_000G1_scaffold_242_12
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13503..13748
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=C0B9J6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL23037.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_130_000G1_scaffold_242_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13878..15551
DNA (1674bp) protein (558aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76574.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_130_000G1_scaffold_242_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15552..17207
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76575.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_130_000G1_scaffold_242_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17200..18753
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76576.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_130_000G1_scaffold_242_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18847..20199
DNA (1353bp) protein (451aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76577.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
abortive infection protein
L3_130_000G1_scaffold_242_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20177..20839
DNA (663bp) protein (221aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77753.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_130_000G1_scaffold_242_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21085..21783
DNA (699bp) protein (233aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEF8_9FIRM
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
sugar fermentation stimulation protein
L3_130_000G1_scaffold_242_19
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21999..23003
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I969_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33502.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L3_130_000G1_scaffold_242_20
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23000..25612
DNA (2613bp) protein (871aa)
Response regulator receiver domain protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G2Z5_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDR47959.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
Signal transduction histidine kinase
L3_130_000G1_scaffold_242_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26344..28308
DNA (1965bp) protein (655aa)
Electron transport complex, rnfabcdge type, C subunit n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEG8_9FIRM
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
rnfC2; electron transport complex protein RnfC2
L3_130_000G1_scaffold_242_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28310..28930
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76590.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Methylene-tetrahydrofolate reductase C terminal.
L3_130_000G1_scaffold_242_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28956..29834
DNA (879bp) protein (293aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Methylenetetrahydrofolate reductase n=2 Tax=Ruminococcus RepID=C6JEH0_9FIRM
5,10-methylenetetrahydrofolate reductase
L3_130_000G1_scaffold_242_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29960..30823)
DNA (864bp) protein (288aa)
ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPL7_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDD80184.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_130_000G1_scaffold_242_25
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30838..31746)
DNA (909bp) protein (303aa)
ABC transporter, permease protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZX14_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EDM85895.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_130_000G1_scaffold_242_26
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31825..33153)
DNA (1329bp) protein (443aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LUD3_9FIRM
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL24391.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_130_000G1_scaffold_242_27
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33240..34253)
DNA (1014bp) protein (338aa)
Sugar-binding domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZX12_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:EDM85893.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
transcriptional regulator, LacI family
L3_130_000G1_scaffold_242_28
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34651..37086
DNA (2436bp) protein (812aa)
cellobiose phosphorylase (EC:2.4.1.20)
Glycosyltransferase family 36 n=2 Tax=Clostridiales RepID=A5ZX10_9FIRM
Glycosyltransferase family 36 {ECO:0000313|EMBL:EDM85891.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
L3_130_000G1_scaffold_242_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37183..39144)
DNA (1962bp) protein (654aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEH1_9FIRM
L3_130_000G1_scaffold_242_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39683..40738
DNA (1056bp) protein (352aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CCY5_9FIRM
Displaying items 1-30 of 109 in total

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