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L3_130_000G1_scaffold_266

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Displaying items 1-30 of 289 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_266_1
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36..230)
DNA (195bp) protein (65aa)
Glycosil hydrolase, family 32 n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EMS4_BIFBS
glycosyl hydrolase family protein
Uncharacterized protein {ECO:0000313|EMBL:CDB22955.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_130_000G1_scaffold_266_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

459..4028
DNA (3570bp) protein (1190aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
DNA polymerase III, alpha subunit n=4 Tax=Bifidobacterium bifidum RepID=E3EMS5_BIFBS
dnaE; DNA polymerase III subunit alpha
L3_130_000G1_scaffold_266_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4158..5213
DNA (1056bp) protein (352aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0C0_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFR49884.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L3_130_000G1_scaffold_266_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5304..5609)
DNA (306bp) protein (102aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=K2MGL5_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF16322.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_130_000G1_scaffold_266_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5797..7674
DNA (1878bp) protein (626aa)
Myosin-cross-reactive antigen n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HVR2_BIFBI
Myosin-cross-reactive antigen {ECO:0000313|EMBL:EKE51588.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
putative 67 kDa myosin-crossreactivestreptococcal antigen
L3_130_000G1_scaffold_266_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7727..8041)
DNA (315bp) protein (105aa)
Chromosomal replication initiation protein n=2 Tax=Bifidobacterium RepID=K2HYP9_BIFBI
Chromosomal replication initiation protein {ECO:0000313|EMBL:EKE51587.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
dnaA; chromosomal replication initiator protein
L3_130_000G1_scaffold_266_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8053..8151)
DNA (99bp) protein (33aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=I3WGS6_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI84012.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_130_000G1_scaffold_266_8
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8258..9298)
DNA (1041bp) protein (347aa)
Helix-turn-helix motif containing protein n=5 Tax=Bifidobacterium RepID=K2IS49_BIFBI
helix-turn-helix motif
Uncharacterized protein {ECO:0000313|EMBL:CDB22949.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_130_000G1_scaffold_266_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9508..10185)
DNA (678bp) protein (226aa)
Aldo/keto reductase family {ECO:0000313|EMBL:KFI42591.1}; EC=1.1.1.188 {ECO:0000313|EMBL:KFI42591.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
2,5-didehydrogluconate reductase n=5 Tax=Bifidobacterium RepID=E3EMT1_BIFBS
2,5-didehydrogluconate reductase
L3_130_000G1_scaffold_266_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10486..11394
DNA (909bp) protein (303aa)
dkgA; 2,5-diketo-D-gluconic acid reductase A (EC:1.1.1.274)
2,5-diketo-D-gluconic acid reductase A n=3 Tax=Bifidobacterium RepID=K2HVQ7_BIFBI
2,5-diketo-D-gluconic acid reductase A {ECO:0000313|EMBL:ERI84015.1}; Putative aldo/keto reductase {ECO:0000313|EMBL:BAQ97717.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_130_000G1_scaffold_266_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11496..11918
DNA (423bp) protein (141aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=R6GNW8_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52750.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_130_000G1_scaffold_266_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12151..12408
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6GEX8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EKF15246.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
hypothetical protein
L3_130_000G1_scaffold_266_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12374..12607
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HBZ8_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE51581.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L3_130_000G1_scaffold_266_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12981..13949)
DNA (969bp) protein (323aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=I3WGT4_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI42596.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_130_000G1_scaffold_266_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14486..15445
DNA (960bp) protein (320aa)
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
Histidinol dehydrogenase n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M2C8_BIFBI
L3_130_000G1_scaffold_266_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15587..16762
DNA (1176bp) protein (392aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Histidinol-phosphate aminotransferase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EMT8_BIFBS
hisC; histidinol-phosphate aminotransferase
L3_130_000G1_scaffold_266_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16900..17502
DNA (603bp) protein (201aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Imidazoleglycerol-phosphate dehydratase n=6 Tax=Bifidobacterium RepID=E3EMT9_BIFBS
hisB; imidazoleglycerol-phosphate dehydratase
L3_130_000G1_scaffold_266_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17502..18215
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EMU0_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52757.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_130_000G1_scaffold_266_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18281..18931
DNA (651bp) protein (217aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Imidazole glycerol phosphate synthase subunit HisH n=2 Tax=Bifidobacterium bifidum RepID=E3EMU1_BIFBS
hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
L3_130_000G1_scaffold_266_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19043..19768
DNA (726bp) protein (242aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EMU2_BIFBS
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase HisA
L3_130_000G1_scaffold_266_21
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19839..21284)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=E4V8G0_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB22935.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_130_000G1_scaffold_266_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21391..22728
DNA (1338bp) protein (446aa)
glnA; glutamine synthetase, type I (EC:6.3.1.2)
Glutamine synthetase, type I {ECO:0000313|EMBL:AFL04106.1}; EC=6.3.1.2 {ECO:0000313|EMBL:AFL04106.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Glutamine synthetase type I, catalytic domain protein n=8 Tax=Bifidobacterium RepID=E3EMU4_BIFBS
L3_130_000G1_scaffold_266_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22855..23928)
DNA (1074bp) protein (358aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EMU5_BIFBS
telomeric repeat-binding factor 2 domain
Uncharacterized protein {ECO:0000313|EMBL:ADO52762.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_130_000G1_scaffold_266_24
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24108..24479
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6H9N1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB22932.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L3_130_000G1_scaffold_266_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24442..25488)
DNA (1047bp) protein (349aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0L1_BIFBP
hypothetical protein
Hemagglutinin-related protein {ECO:0000313|EMBL:AFL04108.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_130_000G1_scaffold_266_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25569..29657)
DNA (4089bp) protein (1363aa)
ATP-dependent helicase HrpA with DUF3418 domain n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EMU8_BIFBS
ATP-dependent helicase HrpA with DUF3418 domain {ECO:0000313|EMBL:ADO52765.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
hrpA; ATP-dependent helicase HrpA
L3_130_000G1_scaffold_266_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29662..30315)
DNA (654bp) protein (218aa)
16S RNA methylase (EC:2.1.1.171)
Methyltransferase small domain protein n=2 Tax=Bifidobacterium bifidum RepID=U2CIZ1_BIFBI
Methyltransferase small domain protein {ECO:0000313|EMBL:ERI84033.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ97733.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_130_000G1_scaffold_266_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30548..31477
DNA (930bp) protein (310aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=E4V8G7_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI84035.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_130_000G1_scaffold_266_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31672..33237
DNA (1566bp) protein (522aa)
GTPase HflX n=5 Tax=Bifidobacterium bifidum RepID=E3EMV1_BIFBS
GTP-binding protein
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L3_130_000G1_scaffold_266_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33429..34391
DNA (963bp) protein (321aa)
ldh; L-lactate dehydrogenase (EC:1.1.1.27)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L-lactate dehydrogenase n=6 Tax=Bifidobacterium RepID=E4P0L6_BIFBP
Displaying items 1-30 of 289 in total

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