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L3_130_000G1_scaffold_273

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_273_1
Trypanosoma congolense, Trypanosoma, Kinetoplastida, Eukaryota

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179..502
DNA (324bp) protein (108aa)
Putative uncharacterized protein TCIL3000_7_3830 n=1 Tax=Trypanosoma congolense (strain IL3000) RepID=G0UQA8_TRYCI
Putative uncharacterized protein TCIL3000_7_3830 {ECO:0000313|EMBL:CCC91569.1}; TaxID=1068625 species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Trypanosoma; Nannomonas.;" source="Trypanosoma congolense (strain IL3000).;"
putative cheA signal transduction histidine kinase
L3_130_000G1_scaffold_273_2
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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613..924
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5FUU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY08618.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_130_000G1_scaffold_273_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1258..2121
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ELZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ58864.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L3_130_000G1_scaffold_273_4
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3185..3433
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R5HPN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30064.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
iron-only hydrogenase system regulator
L3_130_000G1_scaffold_273_5
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3437..4498
DNA (1062bp) protein (354aa)
HydE n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VI50_CLOSH
radical SAM domain-containing protein
Radical SAM domain-containing protein {ECO:0000313|EMBL:AGC67710.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L3_130_000G1_scaffold_273_6
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4554..5978
DNA (1425bp) protein (475aa)
Iron-only hydrogenase maturation rSAM protein HydG n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3S4_9CLOT
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:EEG54005.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
iron-only hydrogenase maturation protein HydG
L3_130_000G1_scaffold_273_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6119..7327
DNA (1209bp) protein (403aa)
Small GTP-binding protein n=4 Tax=Clostridium RepID=E7GNP7_CLOSY
Small GTP-binding protein {ECO:0000313|EMBL:EGA93656.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
iron-only hydrogenase maturation protein HydF
L3_130_000G1_scaffold_273_8
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7375..8289)
DNA (915bp) protein (305aa)
Putative membrane protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENA1_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EEQ59613.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Predicted permease, DMT superfamily
L3_130_000G1_scaffold_273_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8542..9120)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IS78_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY39556.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_130_000G1_scaffold_273_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9342..10064)
DNA (723bp) protein (241aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Cell wall hydrolase/autolysin n=1 Tax=Clostridium sp. CAG:7 RepID=R5IBY4_9CLOT
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:CCY39555.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_130_000G1_scaffold_273_11
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10185..11870)
DNA (1686bp) protein (562aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMK9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97285.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Predicted glycosyl hydrolase
L3_130_000G1_scaffold_273_12
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12109..12363)
DNA (255bp) protein (85aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RPZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17113.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_130_000G1_scaffold_273_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12451..13041)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IS74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY39551.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_130_000G1_scaffold_273_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13032..14471)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IBY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY39550.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
serine/threonine protein kinase
L3_130_000G1_scaffold_273_15
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14691..15431
DNA (741bp) protein (247aa)
Genetic competence negative regulator n=4 Tax=Clostridium RepID=N9YQG0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98535.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
negative regulator of genetic competence
L3_130_000G1_scaffold_273_16
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15815..16552
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0J5S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT27622.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
hypothetical protein
L3_130_000G1_scaffold_273_17
unknown

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16697..17227
DNA (531bp) protein (177aa)

This feature has no annotations

L3_130_000G1_scaffold_273_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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17283..19376
DNA (2094bp) protein (698aa)
Formate C-acetyltransferase {ECO:0000313|EMBL:EEQ58883.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EEQ58883.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
formate acetyltransferase (EC:2.3.1.54)
Formate C-acetyltransferase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EF95_9FIRM
L3_130_000G1_scaffold_273_19
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19516..19761
DNA (246bp) protein (82aa)
Uncharacterized protein n=18 Tax=Clostridium RepID=A8RQ03_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF26291.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
pflB; pyruvate formate-lyase (C-terminus)
L3_130_000G1_scaffold_273_20
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19875..20627
DNA (753bp) protein (251aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CSX1_9CLOT
L3_130_000G1_scaffold_273_21
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20735..21601)
DNA (867bp) protein (289aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=S2Y707_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD60268.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
xylose isomerase
L3_130_000G1_scaffold_273_22
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21617..22618)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=E9RSK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75980.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
lipopolysaccharide biosynthesis protein
L3_130_000G1_scaffold_273_23
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22696..23889)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RSK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88148.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
oxidoreductase
L3_130_000G1_scaffold_273_24
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23926..24822)
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AIS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88149.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
sugar phosphate isomerase
L3_130_000G1_scaffold_273_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25005..26234)
DNA (1230bp) protein (410aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AH00_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFC98916.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
two-component system, response regulator YesN
L3_130_000G1_scaffold_273_26
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26433..26600
DNA (168bp) protein (56aa)
Ferredoxin n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMJ7_9CLOT
Ferredoxin {ECO:0000313|EMBL:EHE97273.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
L3_130_000G1_scaffold_273_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26778..27515
DNA (738bp) protein (246aa)
Peptidase C26 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IGX8_9CLOT
Peptidase C26 {ECO:0000313|EMBL:CCY39544.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
peptidase C26
L3_130_000G1_scaffold_273_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27499..28299)
DNA (801bp) protein (267aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9XGU2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ19369.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_130_000G1_scaffold_273_29
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28296..28862)
DNA (567bp) protein (189aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Clostridium bolteae 90B8 RepID=N9Z9X0_9CLOT
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:ENZ36590.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
RNA polymerase, sigma subunit, ECF family
L3_130_000G1_scaffold_273_30
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29015..29710)
DNA (696bp) protein (232aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=10 Tax=Clostridium RepID=G5HY70_9CLOT
Displaying items 1-30 of 94 in total

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