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L3_130_000G1_scaffold_388

Search features with annotation key words

Displaying items 1-30 of 127 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_388_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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665..2812
DNA (2148bp) protein (716aa)
Methyl-accepting chemotaxis protein signaling domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GAZ4_9FIRM
Methyl-accepting chemotaxis protein signaling domain protein {ECO:0000313|EMBL:EEV01018.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Methyl-accepting chemotaxis protein
L3_130_000G1_scaffold_388_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3097..3405)
DNA (309bp) protein (103aa)
Uncharacterized protein n=3 Tax=Roseburia intestinalis RepID=C7GAZ3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10721.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_130_000G1_scaffold_388_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3392..4102)
DNA (711bp) protein (237aa)
Transposase and inactivated derivatives, IS30 family n=2 Tax=Roseburia intestinalis RepID=D4KU15_9FIRM
Transposase and inactivated derivatives, IS30 family
Transposase and inactivated derivatives, IS30 family {ECO:0000313|EMBL:CBL10855.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_130_000G1_scaffold_388_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4781..5098)
DNA (318bp) protein (106aa)
Uncharacterized protein n=3 Tax=Roseburia intestinalis RepID=C7GAZ0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10722.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_130_000G1_scaffold_388_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5372..5590)
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KU18_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10858.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_130_000G1_scaffold_388_6
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(6008..7366)
DNA (1359bp) protein (453aa)
Phage/plasmid primase P4 family C-terminal domain n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MRP9_9FIRM
Phage/plasmid primase P4 family C-terminal domain {ECO:0000313|EMBL:CDB88497.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
phage/plasmid primase, P4 family, C-terminal domain
L3_130_000G1_scaffold_388_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7363..7848)
DNA (486bp) protein (162aa)
DNA primase (Bacterial type) n=2 Tax=Roseburia intestinalis RepID=D4KK45_9FIRM
DNA primase (bacterial type)
DNA primase (Bacterial type) {ECO:0000313|EMBL:CBL10725.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_130_000G1_scaffold_388_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7979..9100
DNA (1122bp) protein (374aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=C7GAY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV01029.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_130_000G1_scaffold_388_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9181..10020
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GAY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV01028.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_130_000G1_scaffold_388_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10131..10559
DNA (429bp) protein (143aa)
Uncharacterized protein n=3 Tax=Roseburia intestinalis RepID=C7GAY2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10728.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_130_000G1_scaffold_388_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10560..11876)
DNA (1317bp) protein (439aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase n=2 Tax=Roseburia intestinalis RepID=D4KK49_9FIRM
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase {ECO:0000313|EMBL:CBL10729.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_130_000G1_scaffold_388_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11876..12598)
DNA (723bp) protein (241aa)
Response regulator of the LytR/AlgR family n=2 Tax=Roseburia intestinalis RepID=D4KK50_9FIRM
Response regulator of the LytR/AlgR family
Response regulator receiver domain protein {ECO:0000313|EMBL:EEV01025.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_130_000G1_scaffold_388_13
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12789..13148
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FS18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94686.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_130_000G1_scaffold_388_14
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13199..15301
DNA (2103bp) protein (701aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FS17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94685.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_130_000G1_scaffold_388_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15652..15882
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=D4KK54_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10870.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_130_000G1_scaffold_388_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16002..16400
DNA (399bp) protein (133aa)
Transcriptional regulator, TetR family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GAX5_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEV01020.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
TetR family transcriptional regulator
L3_130_000G1_scaffold_388_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16504..17886
DNA (1383bp) protein (461aa)
Uncharacterized conserved protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KU31_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL10871.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_130_000G1_scaffold_388_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17901..19952
DNA (2052bp) protein (684aa)
Alkyl sulfatase and related hydrolases n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KK56_9FIRM
Alkyl sulfatase and related hydrolases {ECO:0000313|EMBL:CBL10736.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Alkyl sulfatase and related hydrolases
L3_130_000G1_scaffold_388_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20260..20907
DNA (648bp) protein (216aa)
Sigma-70 region 2 n=2 Tax=Roseburia RepID=C7GAX2_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:EEV01140.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
RNA polymerase sigma factor, sigma-70 family
L3_130_000G1_scaffold_388_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20971..23160
DNA (2190bp) protein (730aa)
Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KU33_9FIRM
Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats
Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats {ECO:0000313|EMBL:CBL10873.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_130_000G1_scaffold_388_21
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23452..24273
DNA (822bp) protein (274aa)
Esterase/lipase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6ARP4_9FIRM
Esterase/lipase {ECO:0000313|EMBL:CDA53660.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Esterase/lipase
L3_130_000G1_scaffold_388_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24278..25504)
DNA (1227bp) protein (409aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Tyrosine--tRNA ligase n=3 Tax=Roseburia intestinalis RepID=D4KK60_9FIRM
L3_130_000G1_scaffold_388_23
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25577..25990
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BJX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA53662.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_130_000G1_scaffold_388_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26084..26572
DNA (489bp) protein (163aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Roseburia intestinalis RepID=D4KU37_9FIRM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CBL10877.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_130_000G1_scaffold_388_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26575..28005
DNA (1431bp) protein (477aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KU38_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10878.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_130_000G1_scaffold_388_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28216..29046
DNA (831bp) protein (277aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KU39_9FIRM
HAD-superfamily hydrolase, subfamily IIB
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:CBL10879.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_130_000G1_scaffold_388_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29122..29961
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6ARQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA53670.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_130_000G1_scaffold_388_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30147..30704
DNA (558bp) protein (186aa)
Uncharacterized conserved protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KU42_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL10882.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_130_000G1_scaffold_388_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30799..31794
DNA (996bp) protein (332aa)
biotin synthase (EC:2.8.1.6)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Biotin synthase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KU44_9FIRM
L3_130_000G1_scaffold_388_30
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31865..32548
DNA (684bp) protein (228aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
dethiobiotin synthase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6ANP7_9FIRM
Displaying items 1-30 of 127 in total

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