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L3_130_000G1_scaffold_549

Search features with annotation key words

Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_549_1
unknown

Not on your lists

comp(1..69)
DNA (69bp) protein (23aa)

This feature has no annotations

L3_130_000G1_scaffold_549_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(242..1438)
DNA (1197bp) protein (399aa)
Putative carbamoyltransferase YgeW n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BA08_9CLOT
Putative carbamoyltransferase YgeW {ECO:0000313|EMBL:ERI74974.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_130_000G1_scaffold_549_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1534..2946)
DNA (1413bp) protein (471aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CEI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32924.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ArgE; acetylornithine deacetylase
L3_130_000G1_scaffold_549_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3169..4383)
DNA (1215bp) protein (405aa)
Diaminopropionate ammonia-lyase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEI5_9FIRM
Diaminopropionate ammonia-lyase {ECO:0000313|EMBL:EHO32925.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_130_000G1_scaffold_549_5
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4598..7195)
DNA (2598bp) protein (866aa)
Selenium-dependent molybdenum hydroxylase 1 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D5Z4_9CLOT
Selenium-dependent molybdenum hydroxylase 1 {ECO:0000313|EMBL:ERI74971.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
CoxL; aerobic-type carbon monoxide dehydrogenase
L3_130_000G1_scaffold_549_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7277..10273)
DNA (2997bp) protein (999aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32928.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
GltD; NADPH-dependent glutamate synthase beta chain
L3_130_000G1_scaffold_549_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10588..11928)
DNA (1341bp) protein (447aa)
Putative chlorohydrolase/aminohydrolase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2APJ3_9CLOT
Putative chlorohydrolase/aminohydrolase {ECO:0000313|EMBL:ERI67749.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_130_000G1_scaffold_549_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12272..12910
DNA (639bp) protein (213aa)
YheO-like protein n=3 Tax=Clostridiales RepID=G9YQQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32930.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_130_000G1_scaffold_549_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12954..14285)
DNA (1332bp) protein (444aa)
Xanthine permease n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEJ1_9FIRM
Xanthine permease {ECO:0000313|EMBL:EHO32931.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_130_000G1_scaffold_549_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14515..14883)
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CEJ2_9FIRM
Endoribonuclease L-PSP {ECO:0000313|EMBL:KGF56751.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
endoribonuclease L-PSP
L3_130_000G1_scaffold_549_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15075..15842
DNA (768bp) protein (256aa)
sulfate-transporting ATPase (EC:3.6.3.25)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=G9YQQ4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHM50932.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_130_000G1_scaffold_549_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15832..17598
DNA (1767bp) protein (589aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32934.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_130_000G1_scaffold_549_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17709..17978
DNA (270bp) protein (90aa)
Preprotein translocase, SecG subunit n=2 Tax=Clostridiales RepID=G9YQQ6_9FIRM
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:ERI67757.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
secG; preprotein translocase SecG subunit
L3_130_000G1_scaffold_549_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18120..20201
DNA (2082bp) protein (694aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Ribonuclease R n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQQ7_9FIRM
rnr; ribonuclease R
L3_130_000G1_scaffold_549_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20198..21493
DNA (1296bp) protein (432aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Ribonuclease R n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEJ6_9FIRM
glycoside hydrolase family 3
L3_130_000G1_scaffold_549_16
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21744..23843)
DNA (2100bp) protein (700aa)
5'-nucleotidase protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B695_9CLOT
5'-nucleotidase protein {ECO:0000313|EMBL:ERI67760.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_130_000G1_scaffold_549_17
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24032..24955)
DNA (924bp) protein (308aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Pseudouridine-5'-phosphate glycosidase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CKE4_9CLOT
hypothetical protein
L3_130_000G1_scaffold_549_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25006..25536)
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YQR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32940.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_130_000G1_scaffold_549_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25533..26633)
DNA (1101bp) protein (367aa)
pscK; pseudouridine kinase (EC:2.7.1.-)
HTH domain protein n=3 Tax=Clostridiales RepID=G9YQR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32941.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_130_000G1_scaffold_549_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26765..27565
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32942.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_130_000G1_scaffold_549_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27780..28214
DNA (435bp) protein (145aa)
LytTr DNA-binding domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B6A1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56762.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
response regulator
L3_130_000G1_scaffold_549_22
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28230..29060
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CKE8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67766.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_130_000G1_scaffold_549_23
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29060..29458
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CEU4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67767.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_130_000G1_scaffold_549_24
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29600..29998
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B7K5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67768.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_130_000G1_scaffold_549_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30031..31443
DNA (1413bp) protein (471aa)
Amino acid permease n=2 Tax=Clostridiales RepID=U2APL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO32947.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
amino acid permease-associated protein
L3_130_000G1_scaffold_549_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31539..32933
DNA (1395bp) protein (465aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
asnS; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQR9_9FIRM
L3_130_000G1_scaffold_549_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32857..33459)
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32949.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_130_000G1_scaffold_549_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33679..33846)
DNA (168bp) protein (56aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YQS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32950.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_130_000G1_scaffold_549_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33950..34129
DNA (180bp) protein (60aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YQS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32951.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_130_000G1_scaffold_549_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34149..35885)
DNA (1737bp) protein (579aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
phoR; Two-component system sensor histidine kinase PhoR (EC:2.7.13.3)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEL2_9FIRM
Displaying items 1-30 of 119 in total

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