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L3_130_000G1_scaffold_585

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_585_1
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(206..1339)
DNA (1134bp) protein (378aa)
metC; cystathionine beta-lyase MetC (EC:4.4.1.8)
Cystathionine beta-lyase MetC {ECO:0000313|EMBL:AGX41336.1}; EC=4.4.1.8 {ECO:0000313|EMBL:AGX41336.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Cystathionine beta-lyase MetC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNS6_CLOSA
L3_130_000G1_scaffold_585_2
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1433..2569)
DNA (1137bp) protein (379aa)
mccB; cystathionine gamma-lyase MccB (EC:4.4.1.1 4.4.1.2)
Cys/Met metabolism pyridoxal-phosphate-dependent protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7MBS5_9CLOT
Cys/Met metabolism pyridoxal-phosphate-dependent protein {ECO:0000313|EMBL:EHI97252.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
L3_130_000G1_scaffold_585_3
unknown

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3095..3262
DNA (168bp) protein (56aa)

This feature has no annotations

L3_130_000G1_scaffold_585_4
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3500..5233
DNA (1734bp) protein (578aa)
Diguanylate cyclase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FQT6_CLOPA
Diguanylate cyclase {ECO:0000313|EMBL:ETD65777.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
diguanylate cyclase and metal dependent phosphohydrolase
L3_130_000G1_scaffold_585_5
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5429..5695
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXB7_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX45240.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_130_000G1_scaffold_585_6
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5736..8165
DNA (2430bp) protein (810aa)
Copper-exporting P-type ATPase A {ECO:0000313|EMBL:AGX45239.1}; EC=3.6.3.54 {ECO:0000313|EMBL:AGX45239.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Copper/silver-translocating P-type ATPase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U6D4_9CLOT
heavy metal translocating P-type ATPase
L3_130_000G1_scaffold_585_7
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8201..8437
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0003827199
Copper chaperone {ECO:0000313|EMBL:CDL91001.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
copper ion binding protein
L3_130_000G1_scaffold_585_8
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8702..9784)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI00030C625D
Threonyl/alanyl tRNA synthetase, SAD {ECO:0000313|EMBL:AJH01866.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
threonyl/alanyl tRNA synthetase, SAD
L3_130_000G1_scaffold_585_9
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9915..10436
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWQ0_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX45234.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_130_000G1_scaffold_585_10
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10465..11655)
DNA (1191bp) protein (397aa)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6THE5_9CLOT
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:EKQ50585.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
aspartate aminotransferase
L3_130_000G1_scaffold_585_11
unknown

Not on your lists

11927..12145
DNA (219bp) protein (73aa)

This feature has no annotations

L3_130_000G1_scaffold_585_12
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12357..13136
DNA (780bp) protein (260aa)
Methyl-accepting chemotaxis protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U6C0_9CLOT
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EKQ50584.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
methyl-accepting chemotaxis sensory transducer
L3_130_000G1_scaffold_585_13
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14044..14931)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M9H8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHJ02195.1}; Flags: Precursor;; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L3_130_000G1_scaffold_585_14
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14961..15671)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M9H7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHJ02194.1}; Flags: Precursor;; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L3_130_000G1_scaffold_585_15
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16242..16919
DNA (678bp) protein (226aa)
Enzyme with TIM-barrel fold n=1 Tax=Clostridium sp. DL-VIII RepID=G7M9H6_9CLOT
Enzyme with TIM-barrel fold {ECO:0000313|EMBL:EHJ02193.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L3_130_000G1_scaffold_585_16
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17309..18631
DNA (1323bp) protein (441aa)
lysA; diaminopimelate decarboxylase LysA (EC:4.1.1.20)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Diaminopimelate decarboxylase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N0B5_CLOSA
L3_130_000G1_scaffold_585_17
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19006..19554
DNA (549bp) protein (183aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
Signal peptidase I n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G1P5_CLOPA
signal peptidase I
L3_130_000G1_scaffold_585_18
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19620..20198
DNA (579bp) protein (193aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Signal peptidase I n=1 Tax=Clostridium sp. DL-VIII RepID=G7M9G8_9CLOT
signal peptidase I
L3_130_000G1_scaffold_585_19
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20264..20479
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FIW4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG00599.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein DUF3006
L3_130_000G1_scaffold_585_20
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20502..22625
DNA (2124bp) protein (708aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TTH0_9CLOT
ATP-dependent metalloprotease FtsH
L3_130_000G1_scaffold_585_21
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22652..24814
DNA (2163bp) protein (721aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
helD; helicase IV (EC:3.6.4.12)
Helicase, putative n=1 Tax=Clostridium sp. DL-VIII RepID=G7M9G5_9CLOT
L3_130_000G1_scaffold_585_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24950..25513
DNA (564bp) protein (188aa)
Glycerol-3-phosphate responsive antiterminator n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IB59_CLOBU
Glycerol-3-phosphate responsive antiterminator {ECO:0000313|EMBL:EEP56421.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
glpP; glycerol uptake operon antiterminator regulatory protein GlpP
L3_130_000G1_scaffold_585_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25758..26567
DNA (810bp) protein (270aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=M8JE74_CLOBU
Hydrolase (HAD superfamily) {ECO:0000313|EMBL:KJZ88669.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_130_000G1_scaffold_585_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26568..27878
DNA (1311bp) protein (437aa)
UPI0003D59585 related cluster n=1 Tax=unknown RepID=UPI0003D59585
Extracellular solute-binding protein, family 1 {ECO:0000313|EMBL:EEP56300.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
family 1 extracellular solute-binding protein
L3_130_000G1_scaffold_585_25
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28122..29030
DNA (909bp) protein (303aa)
ABC transporter, permease protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JZI0_CLOBU
ABC transporter permease {ECO:0000313|EMBL:KHS57343.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
ABC transporter
L3_130_000G1_scaffold_585_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29020..29847
DNA (828bp) protein (276aa)
ABC transporter, permease protein n=2 Tax=Clostridium butyricum RepID=M8K7L5_CLOBU
Permease protein of sugar ABC transporter {ECO:0000313|EMBL:KJZ88722.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ABC transporter
L3_130_000G1_scaffold_585_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29857..30945
DNA (1089bp) protein (363aa)
glycerol-3-phosphate-transporting ATPase (EC:3.6.3.20)
Lactose transport ATP-binding protein LacK n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IB52_CLOBU
Lactose transport ATP-binding protein LacK {ECO:0000313|EMBL:EEP56299.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L3_130_000G1_scaffold_585_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30948..31745
DNA (798bp) protein (266aa)
UPI0003D5FB99 related cluster n=1 Tax=unknown RepID=UPI0003D5FB99
Sugar phosphate isomerase {ECO:0000313|EMBL:KHD15286.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
sugar phosphate isomerase/epimerase
L3_130_000G1_scaffold_585_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32106..32966
DNA (861bp) protein (287aa)
Amino acid ABC transporter, amino acid-binding protein n=2 Tax=Clostridium butyricum RepID=B1QWQ8_CLOBU
Extracellular solute-binding protein, family 3 {ECO:0000313|EMBL:EEP55890.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
extracellular solute-binding protein
L3_130_000G1_scaffold_585_30
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33037..33696
DNA (660bp) protein (220aa)
Amino acid ABC transporter permease n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G0P3_CLOPA
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:AJH01852.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
polar amino acid ABC transporter, inner membrane subunit
Displaying items 1-30 of 98 in total

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