ggKbase home page

L3_130_000G1_scaffold_3443

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_3443_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..511
DNA (510bp) protein (170aa)
60 kDa chaperonin n=30 Tax=Bacteria RepID=CH60_BIFLD
chaperonin GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_130_000G1_scaffold_3443_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(608..898)
DNA (291bp) protein (97aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=B3DPK5_BIFLD
hypothetical protein
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_130_000G1_scaffold_3443_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

928..1779
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis RepID=Q7WYJ1_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ56149.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L3_130_000G1_scaffold_3443_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1727..2503
DNA (777bp) protein (259aa)
Two component transcriptional regulator, winged helix family n=2 Tax=Bifidobacterium longum RepID=D6ZVL2_BIFLJ
winged helix family two component transcriptional regulator
Putative transcriptional regulatory protein TcrX {ECO:0000313|EMBL:CEF11928.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L3_130_000G1_scaffold_3443_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2534..4525
DNA (1992bp) protein (664aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
Two-component sensor kinase n=11 Tax=Bifidobacterium RepID=E8MEI4_BIFL2
two-component sensor kinase
L3_130_000G1_scaffold_3443_6
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4595..4984
DNA (390bp) protein (130aa)
Cold shock protein n=17 Tax=Bifidobacterium RepID=B3DPK9_BIFLD
cold shock protein
Cold-shock' DNA-binding domain-containing protein {ECO:0000313|EMBL:EFV38213.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L3_130_000G1_scaffold_3443_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4993..6180
DNA (1188bp) protein (396aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=C2GVX2_BIFLN
PF11228 family protein {ECO:0000313|EMBL:EIJ23793.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
hypothetical protein
L3_130_000G1_scaffold_3443_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6292..7257)
DNA (966bp) protein (322aa)
Universal stress protein n=11 Tax=Bifidobacterium RepID=B3DPL1_BIFLD
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ71625.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L3_130_000G1_scaffold_3443_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7407..10016
DNA (2610bp) protein (870aa)
ATP-binding subunit of Clp protease n=14 Tax=Bifidobacterium RepID=B3DPL2_BIFLD
Clp amino terminal domain protein {ECO:0000313|EMBL:EIJ30075.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Clp protease
L3_130_000G1_scaffold_3443_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10196..11515)
DNA (1320bp) protein (440aa)
Cytosine deaminase-like protein n=13 Tax=Bifidobacterium RepID=E4R111_BIFLM
cytosine deaminase
Amidohydrolase family protein {ECO:0000313|EMBL:EEI80580.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_130_000G1_scaffold_3443_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11658..13160
DNA (1503bp) protein (501aa)
Putative transcriptional regulator n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MV28_BIFL1
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:BAJ71622.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L3_130_000G1_scaffold_3443_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13134..13286)
DNA (153bp) protein (51aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XVX5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAP84019.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
hypothetical protein
Displaying 12 items

View Taxonomy