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L3_130_000G1_scaffold_4765

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_4765_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..202
DNA (201bp) protein (67aa)
Uncharacterized protein n=8 Tax=Bifidobacterium longum RepID=B3DS53_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY32928.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_130_000G1_scaffold_4765_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(357..1280)
DNA (924bp) protein (308aa)
Fhu operon transcription regulator n=17 Tax=Bifidobacterium RepID=B3DS52_BIFLD
transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:KEY32929.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_130_000G1_scaffold_4765_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1382..2116)
DNA (735bp) protein (245aa)
Hydrolase n=16 Tax=Bifidobacterium RepID=F8AQJ0_BIFLN
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EEI80195.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hydrolase
L3_130_000G1_scaffold_4765_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2113..3876)
DNA (1764bp) protein (588aa)
Uncharacterized protein n=15 Tax=Bifidobacterium RepID=B3DS50_BIFLD
carbohydrate kinase
Carbohydrate kinase {ECO:0000313|EMBL:AIW43754.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_130_000G1_scaffold_4765_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3916..5106)
DNA (1191bp) protein (397aa)
Aspartate/tyrosine/aromatic aminotransferase n=16 Tax=Bifidobacterium RepID=B3DS49_BIFLD
aspartate aminotransferase
Aspartate aminotransferase {ECO:0000313|EMBL:AIW43755.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_130_000G1_scaffold_4765_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5485..6174)
DNA (690bp) protein (230aa)
Uncharacterized protein n=4 Tax=Bifidobacterium longum RepID=Q8G667_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24597.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_130_000G1_scaffold_4765_7
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6230..7186)
DNA (957bp) protein (319aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=Q8G668_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY96498.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_130_000G1_scaffold_4765_8
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7507..7935
DNA (429bp) protein (143aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=B3DS37_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY96499.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_130_000G1_scaffold_4765_9
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8013..8663
DNA (651bp) protein (217aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Signal peptidase I n=9 Tax=Bifidobacterium RepID=B3DS36_BIFLD
signal peptidase I
L3_130_000G1_scaffold_4765_10
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9018..10451)
DNA (1434bp) protein (478aa)
APC family amino acid-polyamine-organocation transporter n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NGT3_9BIFI
APC family amino acid-polyamine-organocation transporter {ECO:0000313|EMBL:CCY96501.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Amino acid transporters
L3_130_000G1_scaffold_4765_11
unknown

Not on your lists

comp(10503..10631)
DNA (129bp) protein (43aa)

This feature has no annotations

L3_130_000G1_scaffold_4765_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10779..11282)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EB16_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ55191.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L3_130_000G1_scaffold_4765_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11722..12738
DNA (1017bp) protein (339aa)
Membrane protein insertase, YidC/Oxa1 family n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EB18_BIFLI
membrane protein
Membrane protein {ECO:0000313|EMBL:AIW43759.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_130_000G1_scaffold_4765_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13032..13202
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum E18 RepID=V6XW44_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:ESV33535.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
hypothetical protein
L3_130_000G1_scaffold_4765_15
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13555..14091)
DNA (537bp) protein (179aa)
Uncharacterized protein (Fragment) n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EB20_BIFLI
putative secreted protein
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31208.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
L3_130_000G1_scaffold_4765_16
unknown

Not on your lists

comp(14164..14673)
DNA (510bp) protein (170aa)

This feature has no annotations

L3_130_000G1_scaffold_4765_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14680..14892)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZDX3_BIFBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD74938.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_130_000G1_scaffold_4765_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15342..15998
DNA (657bp) protein (219aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S3AFA9_BIFBR
Lantibiotic transport ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI87236.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_130_000G1_scaffold_4765_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16001..16729
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZKP2_BIFBR
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ19410.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
Displaying 19 items

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