ggKbase home page

L3_130_000G1_scaffold_5460

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_5460_1
unknown

Not on your lists

3..107
DNA (105bp) protein (35aa)

This feature has no annotations

L3_130_000G1_scaffold_5460_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(317..2482)
DNA (2166bp) protein (722aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
4-alpha-glucanotransferase n=4 Tax=Bifidobacterium longum RepID=F8AS42_BIFLN
malQ1; 4-alpha-glucanotransferase
L3_130_000G1_scaffold_5460_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2650..3459)
DNA (810bp) protein (270aa)
Leucine rich repeat variant n=16 Tax=Bifidobacterium RepID=D6DC71_BIFLN
hypothetical protein
Leucine rich repeat variant {ECO:0000313|EMBL:CBK70092.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_130_000G1_scaffold_5460_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3401..4042)
DNA (642bp) protein (214aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=B3DPZ6_BIFLD
hypothetical protein
YigZ family protein {ECO:0000313|EMBL:EEQ55968.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_130_000G1_scaffold_5460_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4104..5120)
DNA (1017bp) protein (339aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EIJ24568.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EIJ24568.1};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Phosphoglycerate dehydrogenase and related dehydrogenases n=17 Tax=Bifidobacterium RepID=D6DC73_BIFLN
D-isomer specific 2-hydroxyacid dehydrogenase
L3_130_000G1_scaffold_5460_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5194..6474)
DNA (1281bp) protein (427aa)
Poly-gamma-glutamate biosynthesis protein n=7 Tax=Bifidobacterium longum RepID=B3DPZ4_BIFLD
poly-gamma-glutamate biosynthesis protein
Poly-gamma-glutamate biosynthesis protein {ECO:0000313|EMBL:ADH01197.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_130_000G1_scaffold_5460_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6924..7874)
DNA (951bp) protein (317aa)
Threonine/homoserine efflux transporter n=14 Tax=Bifidobacterium RepID=B3DPZ3_BIFLD
hypothetical protein
Threonine/homoserine efflux transporter {ECO:0000313|EMBL:ACD99132.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_130_000G1_scaffold_5460_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8103..9377
DNA (1275bp) protein (425aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113, ECO:0000313|EMBL:CBK70097.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
DNA polymerase IV n=14 Tax=Bifidobacterium RepID=B3DPZ2_BIFLD
DNA polymerase
L3_130_000G1_scaffold_5460_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9404..10639)
DNA (1236bp) protein (412aa)
succinyldiaminopimelate aminotransferase apoenzyme (EC:2.6.1.17)
Aspartate/tyrosine/aromatic aminotransferase n=10 Tax=Bifidobacterium RepID=B3DPZ1_BIFLD
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:ACD99130.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_130_000G1_scaffold_5460_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10754..11074)
DNA (321bp) protein (107aa)
Ferredoxin n=17 Tax=Bifidobacterium RepID=B3DPZ0_BIFLD
fdxC; ferredoxin
Ferredoxin {ECO:0000313|EMBL:EEQ55961.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_130_000G1_scaffold_5460_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11135..12661)
DNA (1527bp) protein (509aa)
Amino acid transporter n=16 Tax=Bifidobacterium RepID=B3DPY9_BIFLD
amino acid transport protein
Amino acid transporter {ECO:0000313|EMBL:BAP84294.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L3_130_000G1_scaffold_5460_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12813..14036)
DNA (1224bp) protein (408aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AUJ0_BIFLN
UDP-N-acetylmuramate dehydrogenase
L3_130_000G1_scaffold_5460_13
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(14310..14477)
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=25 Tax=Bifidobacterium RepID=RL33_BIFLO
50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reuteri DSM 23975.;"
Displaying 13 items

View Taxonomy