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L3_130_000G1_scaffold_5735

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_5735_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(79..630)
DNA (552bp) protein (184aa)
YbaK/proline--tRNA ligase associated domain protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E6H8_BIFBR
YbaK/proline--tRNA ligase associated domain protein {ECO:0000313|EMBL:ERI88056.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Hypothetical protein with YbaK / prolyl-tRNA synthetases associated domain
L3_130_000G1_scaffold_5735_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(834..2633)
DNA (1800bp) protein (600aa)
Aspartate--tRNA ligase n=6 Tax=Bifidobacterium breve RepID=F6C858_BIFBA
Aspartyl-tRNA synthetase
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AHJ21515.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_130_000G1_scaffold_5735_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(2669..4132)
DNA (1464bp) protein (488aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Histidine--tRNA ligase n=4 Tax=Bifidobacterium breve RepID=F6C857_BIFBA
Histidyl-tRNA synthetase
L3_130_000G1_scaffold_5735_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4160..5605
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CU28_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI88060.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Hypothetical protein with DUF349 domain
L3_130_000G1_scaffold_5735_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5766..7448)
DNA (1683bp) protein (561aa)
5'-nucleotidase protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E6I3_BIFBR
5'-nucleotidase protein {ECO:0000313|EMBL:ERI88061.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Calcineurin-like phosphoesterase
L3_130_000G1_scaffold_5735_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7671..8750)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C854_BIFBA
Esterase/lipase-like protein
Uncharacterized protein {ECO:0000313|EMBL:AEF26948.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_130_000G1_scaffold_5735_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8750..10174)
DNA (1425bp) protein (475aa)
MFS transporter, SP family n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CVH7_BIFBR
MFS transporter, SP family {ECO:0000313|EMBL:ERI88063.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Glucose/fructose transport protein
L3_130_000G1_scaffold_5735_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10361..11230)
DNA (870bp) protein (290aa)
Transcriptional regulator, AraC family n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CC38_BIFBR
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERI88064.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Transcriptional regulator, AraC family
L3_130_000G1_scaffold_5735_9
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11380..13866)
DNA (2487bp) protein (829aa)
ATPase AAA-2 domain protein n=1 Tax=Gardnerella vaginalis 00703Dmash RepID=I4M7S0_GARVA
ATPase AAA-2 domain protein {ECO:0000313|EMBL:EIK85260.1}; TaxID=698960 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis 00703Dmash.;"
Clp-family ATP-binding protease
L3_130_000G1_scaffold_5735_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14019..14777
DNA (759bp) protein (253aa)
Universal stress protein family n=5 Tax=Bifidobacterium breve RepID=F9Y268_BIFBU
Universal stress protein family
Universal stress family protein {ECO:0000313|EMBL:AEF27464.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_130_000G1_scaffold_5735_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14929..15978)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=5 Tax=Bifidobacterium breve RepID=F6C7X4_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ19728.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_130_000G1_scaffold_5735_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15987..16376)
DNA (390bp) protein (130aa)
Cold-shock DNA-binding domain protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CC43_BIFBR
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ERI88069.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
cold-shock protein
L3_130_000G1_scaffold_5735_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16470..18461)
DNA (1992bp) protein (664aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Bifidobacterium breve RepID=U2CU41_BIFBR
Two component system histidine kinase
L3_130_000G1_scaffold_5735_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18472..19203)
DNA (732bp) protein (244aa)
Response regulator receiver domain protein n=5 Tax=Bifidobacterium breve RepID=F6C7X1_BIFBA
Two-component response regulator
Response regulator receiver domain protein {ECO:0000313|EMBL:EFE88803.1}; Two-component response regulator {ECO:0000313|EMBL:BAR00457.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_130_000G1_scaffold_5735_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19196..20032)
DNA (837bp) protein (279aa)
Conserved hypothetical membrane spanning protein n=2 Tax=Bifidobacterium breve RepID=F9Y273_BIFBU
putative membrane spanning protein
Putative uncharacterized protein {ECO:0000313|EMBL:AAT95327.1}; TaxID=1685 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve.;"
L3_130_000G1_scaffold_5735_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20109..20399
DNA (291bp) protein (97aa)
WXG100 family type VII secretion target n=4 Tax=Bifidobacterium breve RepID=F6C7W9_BIFBA
Hypothetical protein with DUF909 domain
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_130_000G1_scaffold_5735_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20584..21093)
DNA (510bp) protein (170aa)
60 kDa chaperonin n=1 Tax=Bifidobacterium breve RepID=Q5YBW3_BIFBR
60 kDa chaperonin GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Displaying 17 items

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