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L3_130_000G1_scaffold_321

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_321_1
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..300)
DNA (300bp) protein (100aa)
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543, ECO:0000313|EMBL:CBL24477.1};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Formate--tetrahydrofolate ligase n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LUL9_9FIRM
L3_130_000G1_scaffold_321_2
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(594..1235)
DNA (642bp) protein (214aa)
Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BIV8_9FIRM
Methenyltetrahydrofolate cyclohydrolase {ECO:0000313|EMBL:CDA64183.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
hypothetical protein
L3_130_000G1_scaffold_321_3
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(1392..2177)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S803_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42797.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Pterin binding enzyme.
L3_130_000G1_scaffold_321_4
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2262..3611)
DNA (1350bp) protein (450aa)
acetyl-CoA decarbonylase/synthase gamma subunit (EC:1.2.99.2 2.1.1.-)
CO dehydrogenase/acetyl-CoA synthase delta subunit n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LCK8_9FIRM
CO dehydrogenase/acetyl-CoA synthase delta subunit {ECO:0000313|EMBL:EET61672.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
L3_130_000G1_scaffold_321_5
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(3639..4580)
DNA (942bp) protein (314aa)
CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein) (EC:1.2.99.2)
Corrinoid/iron-sulfur protein small subunit n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CG06_9FIRM
Corrinoid/iron-sulfur protein small subunit {ECO:0000313|EMBL:CDA64187.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
L3_130_000G1_scaffold_321_6
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(4877..7006)
DNA (2130bp) protein (710aa)
carbon monoxide dehydrogenase/acetyl-coa synthase subunit alpha (EC:2.3.1.169)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R709_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34524.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_130_000G1_scaffold_321_7
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7021..7791)
DNA (771bp) protein (257aa)
CO dehydrogenase/acetyl-CoA synthase complex accessory protein CooC n=1 Tax=Blautia sp. CAG:52 RepID=R6GI88_9FIRM
CO dehydrogenase/acetyl-CoA synthase complex accessory protein CooC {ECO:0000313|EMBL:CDB21339.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
CO dehydrogenase maturation factor
L3_130_000G1_scaffold_321_8
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(7845..9737)
DNA (1893bp) protein (631aa)
carbon-monoxide dehydrogenase, catalytic subunit (EC:1.2.99.2)
Carbon-monoxide dehydrogenase catalytic subunit n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RNV4_9FIRM
Carbon-monoxide dehydrogenase catalytic subunit {ECO:0000313|EMBL:CCZ34522.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_130_000G1_scaffold_321_9
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(9842..10612)
DNA (771bp) protein (257aa)
CO dehydrogenase/acetyl-CoA synthase complex accessory protein CooC n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CG10_9FIRM
CO dehydrogenase/acetyl-CoA synthase complex accessory protein CooC {ECO:0000313|EMBL:CDA64192.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
CO dehydrogenase maturation factor
L3_130_000G1_scaffold_321_10
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11162..11347)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HRK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32365.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Predicted RNA-binding protein.
L3_130_000G1_scaffold_321_11
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(11360..11701)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BM35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA64195.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
hypothetical protein
L3_130_000G1_scaffold_321_12
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12047..12844)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B5N7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD59951.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
ABC-type uncharacterized transport system, ATPase component
L3_130_000G1_scaffold_321_13
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12856..13770)
DNA (915bp) protein (305aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JM22_CELLD
ABC transporter permease
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:ADZ85802.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_130_000G1_scaffold_321_14
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13860..14846)
DNA (987bp) protein (329aa)
ABC transporter substrate binding protein n=1 Tax=Anaerostipes sp. 3_2_56FAA RepID=E5VWT6_9FIRM
ABC transporter substrate binding protein {ECO:0000313|EMBL:EFV21722.1}; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
ABC transporter substrate-binding protein
L3_130_000G1_scaffold_321_15
unknown

Not on your lists

comp(14851..15045)
DNA (195bp) protein (65aa)

This feature has no annotations

L3_130_000G1_scaffold_321_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15080..16090)
DNA (1011bp) protein (337aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
glycerol 3-phosphate dehydrogenase (NAD(P)+) (EC:1.1.1.94)
glycerol-3-phosphate dehydrogenase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E726EF
L3_130_000G1_scaffold_321_17
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(16110..16754)
DNA (645bp) protein (215aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CG18_9FIRM
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
acyl-phosphate glycerol-3-phosphate acyltransferase
L3_130_000G1_scaffold_321_18
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(16756..18084)
DNA (1329bp) protein (443aa)
GTPase Der n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BIX6_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
ribosome-associated GTPase EngA
L3_130_000G1_scaffold_321_19
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(18077..19438)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BTB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA64204.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Fe-S oxidoreductase, related to NifB/MoaA family
L3_130_000G1_scaffold_321_20
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

19821..20990
DNA (1170bp) protein (390aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BM43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA64205.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
L3_130_000G1_scaffold_321_21
Streptococcus anginosus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21109..21660)
DNA (552bp) protein (184aa)
Acetyltransferase, GNAT family n=3 Tax=Streptococcus anginosus RepID=E6J2J9_STRAP
acetyltransferase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFU22135.1}; TaxID=706437 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="Streptococcus anginosus F0211.;"
L3_130_000G1_scaffold_321_22
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21662..22591)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LCM6_9FIRM
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
conserved hypothetical protein TIGR00726
L3_130_000G1_scaffold_321_23
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22561..23025)
DNA (465bp) protein (155aa)
UPF0102 protein BRYFOR_06374 n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LCM7_9FIRM
UPF0102 protein BRYFOR_06374 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
conserved hypothetical protein TIGR00252
L3_130_000G1_scaffold_321_24
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23022..23780)
DNA (759bp) protein (253aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
Ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Roseburia sp. CAG:471 RepID=R7EGD6_9FIRM
L3_130_000G1_scaffold_321_25
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23793..24407)
DNA (615bp) protein (205aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I n=2 Tax=Coprococcus RepID=C0BCP1_9FIRM
L3_130_000G1_scaffold_321_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24418..25269)
DNA (852bp) protein (284aa)
Ribosome biogenesis GTPase A n=2 Tax=Clostridium RepID=B6FSB4_9CLOT
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ribosome biogenesis GTP-binding protein YlqF
L3_130_000G1_scaffold_321_27
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(25302..25874)
DNA (573bp) protein (191aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Signal peptidase I n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BLV9_9FIRM
signal peptidase I
L3_130_000G1_scaffold_321_28
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists


comp(25967..26314)
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=1 Tax=Blautia producta RepID=UPI00037BD60B
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ribosomal protein L19, bacterial type
L3_130_000G1_scaffold_321_29
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(26418..27158)
DNA (741bp) protein (247aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QY38_9FIRM
L3_130_000G1_scaffold_321_30
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27171..27677)
DNA (507bp) protein (169aa)
Ribosome maturation factor RimM n=3 Tax=Lachnospiraceae RepID=F3AJD1_9FIRM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
rimM; 16S rRNA-processing protein RimM
Displaying items 1-30 of 83 in total

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