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L3_130_000G1_scaffold_1093

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_1093_1
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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220..540
DNA (321bp) protein (107aa)
DNA-binding helix-turn-helix protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RPT8_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK52732.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Helix-turn-helix.
L3_130_000G1_scaffold_1093_2
unknown

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comp(774..1340)
DNA (567bp) protein (189aa)

This feature has no annotations

L3_130_000G1_scaffold_1093_3
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1775..3157)
DNA (1383bp) protein (461aa)
wapA2; tRNA3(Ser)-specific nuclease WapA (EC:3.1.-.-)
Uncharacterized protein (Fragment) n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I745_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETA81688.1}; Flags: Fragment;; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
L3_130_000G1_scaffold_1093_4
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(3717..4415)
DNA (699bp) protein (233aa)
Putative membrane protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R4E4_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CCZ36050.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_130_000G1_scaffold_1093_5
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4412..5137)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000374B7A8
Uncharacterized protein {ECO:0000313|EMBL:EOS42057.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
radical SAM-superfamily protein
L3_130_000G1_scaffold_1093_6
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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5511..6554
DNA (1044bp) protein (348aa)
Putative tetratricopeptide repeat-containing domain protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BZA6_9FIRM
Putative tetratricopeptide repeat-containing domain protein {ECO:0000313|EMBL:CDA64506.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
hypothetical protein
L3_130_000G1_scaffold_1093_7
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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6585..7832
DNA (1248bp) protein (416aa)
GTPase HflX n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BCI5_9FIRM
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
small GTP-binding protein domain containing protein
L3_130_000G1_scaffold_1093_8
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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8246..10609
DNA (2364bp) protein (788aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BJU3_9FIRM
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CDA64508.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
L3_130_000G1_scaffold_1093_9
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10822..11022)
DNA (201bp) protein (67aa)
Cold-shock DNA-binding domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LAK5_9FIRM
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EET62612.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
cold-shock DNA-binding protein family
L3_130_000G1_scaffold_1093_10
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11327..12616
DNA (1290bp) protein (430aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KSE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38945.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
tRNA nucleotidyltransferase
L3_130_000G1_scaffold_1093_11
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12657..13637
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LFH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET60558.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
CotS family spore coat protein
L3_130_000G1_scaffold_1093_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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13713..15446
DNA (1734bp) protein (578aa)
alpha-phosphoglucomutase (EC:5.4.2.2 5.4.2.8)
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II n=2 Tax=Clostridium RepID=B6FPQ8_9CLOT
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II {ECO:0000313|EMBL:EEA82017.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_130_000G1_scaffold_1093_13
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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15433..15945
DNA (513bp) protein (171aa)
MazG protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BU96_9FIRM
MazG protein {ECO:0000313|EMBL:CDA64514.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
MazG family protein
L3_130_000G1_scaffold_1093_14
unknown

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15923..16078
DNA (156bp) protein (52aa)

This feature has no annotations

L3_130_000G1_scaffold_1093_15
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16276..16551
DNA (276bp) protein (92aa)
Bacterial nucleoid DNA-binding protein n=1 Tax=Coprococcus sp. CAG:782 RepID=R5JI34_9FIRM
Bacterial nucleoid DNA-binding protein {ECO:0000313|EMBL:CCY54228.1}; TaxID=1262863 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:782.;"
Bacterial nucleoid DNA-binding protein
L3_130_000G1_scaffold_1093_16
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16669..16908
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6GA53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB21230.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
RNA-binding S4 domain-containing protein
L3_130_000G1_scaffold_1093_17
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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16978..17259
DNA (282bp) protein (94aa)
Sporulation protein YabP n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IV60_9FIRM
Sporulation protein YabP {ECO:0000313|EMBL:EOS25789.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
sporulation protein YabP
L3_130_000G1_scaffold_1093_18
unknown

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17637..17789
DNA (153bp) protein (51aa)

This feature has no annotations

L3_130_000G1_scaffold_1093_19
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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17729..18043
DNA (315bp) protein (105aa)
Septum formation initiator n=2 Tax=Coprococcus RepID=C0B9U2_9FIRM
Septum formation initiator {ECO:0000313|EMBL:CDB85862.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Septum formation initiator.
L3_130_000G1_scaffold_1093_20
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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18466..19947
DNA (1482bp) protein (494aa)
Stage II sporulation protein E (SpoIIE). (EC:3.1.3.16)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LFG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET60550.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
L3_130_000G1_scaffold_1093_21
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

20046..21440
DNA (1395bp) protein (465aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BZB8_9FIRM
L3_130_000G1_scaffold_1093_22
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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21424..21945
DNA (522bp) protein (174aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CGZ7_9FIRM
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CDA64522.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
L3_130_000G1_scaffold_1093_23
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21962..23788
DNA (1827bp) protein (609aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LFG2_9FIRM
microtubule-severing ATPase
L3_130_000G1_scaffold_1093_24
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

24105..26219
DNA (2115bp) protein (705aa)
Glycosidases (EC:3.2.1.20)
Amylopullulanase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BUN3_9FIRM
Amylopullulanase {ECO:0000313|EMBL:CDA62846.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
L3_130_000G1_scaffold_1093_25
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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26743..27672
DNA (930bp) protein (310aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
cysteine synthase A (EC:2.5.1.47)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7ED72_9FIRM
L3_130_000G1_scaffold_1093_26
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27807..29315)
DNA (1509bp) protein (503aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRZ2_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG47445.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
hypothetical protein
L3_130_000G1_scaffold_1093_27
unknown

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29414..29758
DNA (345bp) protein (115aa)

This feature has no annotations

L3_130_000G1_scaffold_1093_28
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29605..30393)
DNA (789bp) protein (263aa)
anaerobic cobaltochelatase (EC:4.99.1.3)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5C1G8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX60399.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
L3_130_000G1_scaffold_1093_29
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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30716..31954
DNA (1239bp) protein (413aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=1 Tax=Blautia sp. CAG:257 RepID=R5XBN9_9FIRM
L3_130_000G1_scaffold_1093_30
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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32822..34312
DNA (1491bp) protein (497aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HPT7_9FIRM
Displaying items 1-30 of 35 in total

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