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L3_130_000G1_scaffold_1097

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_1097_1
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..609)
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CR76_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG47742.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
N-acetylmuramoyl-L-alanine amidase
L3_130_000G1_scaffold_1097_2
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(862..1218)
DNA (357bp) protein (119aa)
Stage V sporulation protein AE n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C0A5_9CLOT
Stage V sporulation protein AE {ECO:0000313|EMBL:EEG74242.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
stage V sporulation protein AE
L3_130_000G1_scaffold_1097_3
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1231..2265)
DNA (1035bp) protein (345aa)
Stage V sporulation protein AD n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LMC3_9FIRM
Stage V sporulation protein AD {ECO:0000313|EMBL:EET58224.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Stage V sporulation protein AD (SpoVAD).
L3_130_000G1_scaffold_1097_4
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2262..2735)
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5BZM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX58077.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
stage V sporulation AC, SpoVAC
L3_130_000G1_scaffold_1097_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2812..4134)
DNA (1323bp) protein (441aa)
Na+/H+ antiporter family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FST0_9CLOT
Na+/H+ antiporter family protein {ECO:0000313|EMBL:EEA80881.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
putative methionine transporter, NhaC family (TC 2.A.35.1.-)
L3_130_000G1_scaffold_1097_6
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(4214..4627)
DNA (414bp) protein (138aa)
Stage V sporulation protein AB n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BY18_9FIRM
Stage V sporulation protein AB {ECO:0000313|EMBL:CDA64066.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
hypothetical protein
L3_130_000G1_scaffold_1097_7
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4628..5242)
DNA (615bp) protein (205aa)
Stage V sporulation protein AA n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LLF6_9FIRM
Stage V sporulation protein AA {ECO:0000313|EMBL:EET58579.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Stage V sporulation protein AA.
L3_130_000G1_scaffold_1097_8
unknown

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comp(5214..5417)
DNA (204bp) protein (68aa)

This feature has no annotations

L3_130_000G1_scaffold_1097_9
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(5651..10240)
DNA (4590bp) protein (1530aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
Beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LWN5_TEPAE
L3_130_000G1_scaffold_1097_10
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(10534..15126)
DNA (4593bp) protein (1531aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
Beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LWN5_TEPAE
L3_130_000G1_scaffold_1097_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15345..16064)
DNA (720bp) protein (240aa)
RNA polymerase sigma factor n=3 Tax=Clostridium RepID=B6FUR6_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, sigma-B/F/G subfamily
L3_130_000G1_scaffold_1097_12
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16077..16523)
DNA (447bp) protein (149aa)
Anti-sigma F factor {ECO:0000313|EMBL:EET58577.1}; EC=2.7.11.1 {ECO:0000313|EMBL:EET58577.1};; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LLF4_9FIRM
L3_130_000G1_scaffold_1097_13
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16539..16871)
DNA (333bp) protein (111aa)
Anti-sigma factor antagonist n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LLF3_9FIRM
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
anti-anti-sigma factor
L3_130_000G1_scaffold_1097_14
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(16987..18540)
DNA (1554bp) protein (518aa)
Putative tetratricopeptide repeat-containing domain protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BLS6_9FIRM
Putative tetratricopeptide repeat-containing domain protein {ECO:0000313|EMBL:CDA64060.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Tetratricopeptide repeat.
L3_130_000G1_scaffold_1097_15
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18550..18696)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LLF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET58574.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L3_130_000G1_scaffold_1097_16
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(18729..20030)
DNA (1302bp) protein (434aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.12 6.3.2.17)
Tetrahydrofolylpolyglutamate synthase/dihydrofolate synthase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BIK4_9FIRM
Tetrahydrofolylpolyglutamate synthase/dihydrofolate synthase {ECO:0000313|EMBL:CDA64058.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
L3_130_000G1_scaffold_1097_17
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20312..21607)
DNA (1296bp) protein (432aa)
Molybdenum ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LUZ1_9FIRM
molybdenum ABC transporter, periplasmic molybdate-binding protein
Molybdenum ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:CBL24599.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_130_000G1_scaffold_1097_18
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(21838..23157)
DNA (1320bp) protein (440aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BUA2_9FIRM
L3_130_000G1_scaffold_1097_19
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23182..23763)
DNA (582bp) protein (194aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Xanthine phosphoribosyltransferase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YHC2_9FIRM
xanthine phosphoribosyltransferase
L3_130_000G1_scaffold_1097_20
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23886..25088)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6CTS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA68712.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
sodium/proton-potassium antiporter GerN, CPA2 family (TC 2.A.37.2.2)
L3_130_000G1_scaffold_1097_21
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25351..26364
DNA (1014bp) protein (338aa)
Transcriptional regulator LacI family n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TBU7_9CLOT
Transcriptional regulator LacI family {ECO:0000313|EMBL:CCZ63135.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
transcriptional regulator, LacI family
L3_130_000G1_scaffold_1097_22
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26464..26637
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HXD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29146.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_130_000G1_scaffold_1097_23
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

26654..27157
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6WAG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC91227.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
L3_130_000G1_scaffold_1097_24
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27326..27778)
DNA (453bp) protein (151aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HT99_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCY32970.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L3_130_000G1_scaffold_1097_25
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27765..28259)
DNA (495bp) protein (165aa)
mog; molybdopterin adenylyltransferase Mog (EC:2.7.7.75)
Molybdopterin adenylyltransferase Mog {ECO:0000313|EMBL:AGX43613.1}; EC=2.7.7.75 {ECO:0000313|EMBL:AGX43613.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Molybdopterin adenylyltransferase Mog n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSW3_CLOSA
L3_130_000G1_scaffold_1097_26
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28361..29332)
DNA (972bp) protein (324aa)
Cyclic pyranopterin phosphate synthase {ECO:0000256|SAAS:SAAS00064088}; EC=4.1.99.18 {ECO:0000256|SAAS:SAAS00064088};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Molybdenum cofactor biosynthesis protein A n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I883_9FIRM
GTP cyclohydrolase subunit MoaA
L3_130_000G1_scaffold_1097_27
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(29325..29804)
DNA (480bp) protein (160aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6V3N9_9FIRM
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
moaC; molybdenum cofactor biosynthesis protein C
L3_130_000G1_scaffold_1097_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29886..30500)
DNA (615bp) protein (205aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B767_RUMGN
peptidyl-prolyl cis-trans isomerase B
L3_130_000G1_scaffold_1097_29
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30567..31925)
DNA (1359bp) protein (453aa)
Putative MATE efflux family protein DinF n=1 Tax=Clostridium sp. CAG:169 RepID=R6BTI5_9CLOT
Putative MATE efflux family protein DinF {ECO:0000313|EMBL:CDA62456.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
putative efflux protein, MATE family
L3_130_000G1_scaffold_1097_30
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32010..33209)
DNA (1200bp) protein (400aa)
Predicted phosphohydrolases n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSS2_9FIRM
Predicted phosphohydrolases {ECO:0000313|EMBL:CCY32795.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Predicted phosphohydrolases
Displaying items 1-30 of 34 in total

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