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L3_130_000G1_scaffold_1789

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_1789_1
unknown

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comp(3..149)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FLF6_9FIRM
L3_130_000G1_scaffold_1789_2
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(722..1261)
DNA (540bp) protein (180aa)
UPF0340 protein BN555_02366 n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H3Q3_9FIRM
UPF0340 protein BN555_02366 {ECO:0000256|HAMAP-Rule:MF_00800}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_130_000G1_scaffold_1789_3
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1358..2089)
DNA (732bp) protein (244aa)
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
Transcriptional regulator, Sir2 family n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C377_9CLOT
Transcriptional regulator, Sir2 family {ECO:0000313|EMBL:EEG73427.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
L3_130_000G1_scaffold_1789_4
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2152..2550)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000371111F
Uncharacterized protein {ECO:0000313|EMBL:CCX58568.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
hypothetical protein
L3_130_000G1_scaffold_1789_5
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(2525..3490)
DNA (966bp) protein (322aa)
Transporter small conductance mechanosensitive ion channel MscS family protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BRF6_9FIRM
Transporter small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:CDA63514.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Small-conductance mechanosensitive channel
L3_130_000G1_scaffold_1789_6
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(3519..6143)
DNA (2625bp) protein (875aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
glycogen branching enzyme (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BK01_9FIRM
L3_130_000G1_scaffold_1789_7
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6266..7516)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0J957_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT23536.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
hypothetical protein
L3_130_000G1_scaffold_1789_8
unknown

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comp(7533..7796)
DNA (264bp) protein (88aa)

This feature has no annotations

L3_130_000G1_scaffold_1789_9
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7809..8972)
DNA (1164bp) protein (388aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EET61015.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EET61015.1};; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
4-phosphoerythronate dehydrogenase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LEN2_9FIRM
hypothetical protein
L3_130_000G1_scaffold_1789_10
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8974..10056)
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LEN1_9FIRM
L3_130_000G1_scaffold_1789_11
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(10223..11893)
DNA (1671bp) protein (557aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BRF8_9FIRM
L3_130_000G1_scaffold_1789_12
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11910..13580)
DNA (1671bp) protein (557aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Blautia sp. CAG:52 RepID=R6G266_9FIRM
L3_130_000G1_scaffold_1789_13
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(13619..14701)
DNA (1083bp) protein (361aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BWK6_9FIRM
L3_130_000G1_scaffold_1789_14
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15129..15305)
DNA (177bp) protein (59aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
Hydroxyethylthiazole kinase n=1 Tax=Lachnospiraceae oral taxon 107 str. F0167 RepID=F3B0Q1_9FIRM
L3_130_000G1_scaffold_1789_15
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15326..15844)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Streptococcus henryi RepID=UPI0003655E14
thiW protein
ThiW protein {ECO:0000313|EMBL:CCY09257.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_130_000G1_scaffold_1789_16
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16463..16774)
DNA (312bp) protein (104aa)
Preprotein translocase, YajC subunit n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LEM6_9FIRM
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EET61009.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
protein translocase subunit yajC
L3_130_000G1_scaffold_1789_17
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(16957..18090)
DNA (1134bp) protein (378aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CER8_9FIRM
L3_130_000G1_scaffold_1789_18
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18470..22768
DNA (4299bp) protein (1433aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LEM4_9FIRM
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:EET61007.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
putative R-2-hydroxyglutaryl-CoA dehydratase subunit/R-2-hydroxyglutaryl-CoA dehydratase activase
L3_130_000G1_scaffold_1789_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22857..23462)
DNA (606bp) protein (202aa)
TIGR04100 family radical SAM enzyme n=2 Tax=Ruminococcus RepID=C6JBF6_9FIRM
Radical SAM-superfamily protein {ECO:0000313|EMBL:CDD79269.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Radical SAM superfamily.
L3_130_000G1_scaffold_1789_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23554..24153)
DNA (600bp) protein (200aa)
TIGR04002 family protein n=2 Tax=Ruminococcus RepID=C6JBF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79267.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_130_000G1_scaffold_1789_21
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24101..25006)
DNA (906bp) protein (302aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
Pyridoxal/pyridoxine/pyridoxamine kinase (EC:2.7.1.35)
Putative pyridoxal kinase n=1 Tax=Blautia sp. CAG:237 RepID=R6KUW4_9FIRM
Displaying 21 items

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