ggKbase home page

L3_130_000G1_scaffold_1870

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000G1_scaffold_1870_1
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

3..698
DNA (696bp) protein (232aa)
Putative type I restriction-modification system specificity protein n=1 Tax=Oleispira antarctica RB-8 RepID=R4YRV8_OLEAN
restriction modification system DNA specificity domain protein
Tax=CG_CPR17-01
L3_130_000G1_scaffold_1870_2
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

711..3968
DNA (3258bp) protein (1086aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5XAC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA05351.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
DEAD/DEAH box helicase
L3_130_000G1_scaffold_1870_3
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4332..4997
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AQI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87839.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L3_130_000G1_scaffold_1870_4
unknown

Not on your lists

5033..5287
DNA (255bp) protein (85aa)

This feature has no annotations

L3_130_000G1_scaffold_1870_5
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5163..6041)
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AQI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87838.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L3_130_000G1_scaffold_1870_6
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6184..6360
DNA (177bp) protein (59aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B971_9FIRM
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EGG84921.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
DNA binding domain, excisionase family
L3_130_000G1_scaffold_1870_7
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6397..8706
DNA (2310bp) protein (770aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AQI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87836.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
phage/plasmid primase, P4 family, C-terminal domain
L3_130_000G1_scaffold_1870_8
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8720..8959
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=F3B969_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84919.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_130_000G1_scaffold_1870_9
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8980..9900
DNA (921bp) protein (307aa)
Phage capsid family protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AQI0_9FIRM
Phage capsid family protein {ECO:0000313|EMBL:EGG87834.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Predicted phage phi-C31 gp36 major capsid-like protein
L3_130_000G1_scaffold_1870_10
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9947..10180
DNA (234bp) protein (78aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B967_9FIRM
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EGG84917.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
DNA binding domain, excisionase family
L3_130_000G1_scaffold_1870_11
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10281..10511
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AQH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87832.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Excisionase from transposon Tn916.
L3_130_000G1_scaffold_1870_12
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10489..11751
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AQH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87831.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Site-specific recombinase XerD
L3_130_000G1_scaffold_1870_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12061..12531
DNA (471bp) protein (157aa)
Protein-tyrosine phosphatase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XIM0_9CLOT
Protein-tyrosine phosphatase {ECO:0000313|EMBL:ENY95491.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
protein tyrosine phosphatase
L3_130_000G1_scaffold_1870_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12901..14946
DNA (2046bp) protein (682aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J2V8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43376.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
peptidase M28
L3_130_000G1_scaffold_1870_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14951..15589
DNA (639bp) protein (213aa)
Acetyltransferase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XUM0_9CLOT
Acetyltransferase {ECO:0000313|EMBL:ENY99261.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
N-acetyltransferase GCN5
L3_130_000G1_scaffold_1870_16
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15889..17439
DNA (1551bp) protein (517aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000309C6CB
Uncharacterized protein {ECO:0000313|EMBL:CCY32895.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Predicted secreted protein
L3_130_000G1_scaffold_1870_17
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(17723..18913)
DNA (1191bp) protein (397aa)
Putative reductase BN546_00219 {ECO:0000256|HAMAP-Rule:MF_01838}; EC=1.3.1.- {ECO:0000256|HAMAP-Rule:MF_01838};; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
Uncharacterized paraquat-inducible protein B (EC:1.3.1.44)
Putative reductase BN546_00219 n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6WHE9_9FIRM
L3_130_000G1_scaffold_1870_18
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19255..20748)
DNA (1494bp) protein (498aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
UTP-hexose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MLE4_9FIRM
L3_130_000G1_scaffold_1870_19
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(20772..21938)
DNA (1167bp) protein (389aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
galactokinase (EC:2.7.1.6)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037A8603
L3_130_000G1_scaffold_1870_20
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

22129..23178
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZD59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD46328.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
putative lipid kinase
L3_130_000G1_scaffold_1870_21
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23261..24124
DNA (864bp) protein (288aa)
fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase n=3 Tax=Lachnospiraceae RepID=F3AMP4_9FIRM
Fructose-1,6-bisphosphate aldolase {ECO:0000313|EMBL:EGG85624.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Displaying 21 items

View Taxonomy