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L3_130_000M1_scaffold_1020

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000M1_scaffold_1020_1
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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211..2025
DNA (1815bp) protein (605aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Methionine synthase I (cobalamin-dependent), methyltransferase domain (EC:2.1.1.10 2.1.1.13)
Methylenetetrahydrofolate reductase n=1 Tax=Roseburia sp. CAG:50 RepID=R5TEW0_9FIRM
L3_130_000M1_scaffold_1020_2
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2196..4646
DNA (2451bp) protein (817aa)
methionine synthase (B12-dependent) (EC:2.1.1.13)
Vitamin B12-dependent methionine synthase family protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NXE0_9FIRM
Vitamin B12-dependent methionine synthase family protein {ECO:0000313|EMBL:CDC13049.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
L3_130_000M1_scaffold_1020_3
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4774..5139)
DNA (366bp) protein (122aa)
SnoaL-like polyketide cyclase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2NZ84_9FIRM
SnoaL-like polyketide cyclase {ECO:0000313|EMBL:ERK43430.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_130_000M1_scaffold_1020_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5477..6040
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77513.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_130_000M1_scaffold_1020_5
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6157..6456
DNA (300bp) protein (100aa)
TrpR family protein YerC/YecD n=2 Tax=Clostridiales RepID=U2PGY1_9FIRM
TrpR-related protein YerC/YecD {ECO:0000313|EMBL:CCZ64194.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
TrpR-related protein YerC/YecD
L3_130_000M1_scaffold_1020_6
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6502..7128)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QXF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK43432.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Domain of unknown function (DUF1836).
L3_130_000M1_scaffold_1020_7
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7174..9687
DNA (2514bp) protein (838aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
ATP-dependent DNA helicase PcrA n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IKE1_9FIRM
L3_130_000M1_scaffold_1020_8
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9809..10060
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U542_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64197.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_130_000M1_scaffold_1020_9
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10306..11715
DNA (1410bp) protein (470aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2NZ89_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:ERK43435.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
tRNA (uracil-5-) -methyltransferase
Displaying 9 items

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