ggKbase home page

L3_130_000M1_scaffold_1041

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000M1_scaffold_1041_1
unknown

Not on your lists

comp(519..701)
DNA (183bp) protein (61aa)

This feature has no annotations

L3_130_000M1_scaffold_1041_2
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

827..1267
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U6S6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64747.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_130_000M1_scaffold_1041_3
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1370..1624)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2QXN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64746.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_130_000M1_scaffold_1041_4
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1908..2840
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TN27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64744.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Lysophospholipase
L3_130_000M1_scaffold_1041_5
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3115..5070)
DNA (1956bp) protein (652aa)
EIICB-Mtl n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QQA8_9FIRM
EIICB-Mtl {ECO:0000313|EMBL:ERK43478.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
PTS system D-mannitol-specific IIA component, Fru family (TC 4.A.2.1.2)/PTS system D-mannitol-specific IIB component, Fru family (TC 4.A.2.1.2)/PTS system D-mannitol-specific IIC component, Fru family (TC 4.A.2.1.2)
L3_130_000M1_scaffold_1041_6
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5167..5928)
DNA (762bp) protein (254aa)
Transcriptional regulator, DeoR family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QXM8_9FIRM
Transcriptional regulators of sugar metabolism {ECO:0000313|EMBL:CCZ64742.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Transcriptional regulators of sugar metabolism
L3_130_000M1_scaffold_1041_7
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5989..7257)
DNA (1269bp) protein (423aa)
GroES-like protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PH53_9FIRM
GroES-like protein {ECO:0000313|EMBL:ERK43476.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Threonine dehydrogenase and related Zn-dependent dehydrogenases
L3_130_000M1_scaffold_1041_8
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7691..7900)
DNA (210bp) protein (70aa)
Small acid-soluble spore proteins alpha/beta type n=2 Tax=Clostridiales RepID=R5TN23_9FIRM
Small acid-soluble spore proteins alpha/beta type {ECO:0000313|EMBL:CCZ64739.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_130_000M1_scaffold_1041_9
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8121..9047)
DNA (927bp) protein (309aa)
Transcriptional regulator, LysR family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PIT9_9FIRM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ERK43669.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Transcriptional regulator
L3_130_000M1_scaffold_1041_10
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9177..10433)
DNA (1257bp) protein (419aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Beta-glucosidase-related glycosidases (EC:3.2.1.52)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CPR6_9FIRM
L3_130_000M1_scaffold_1041_11
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10447..11301)
DNA (855bp) protein (285aa)
Lectin C-type domain protein n=2 Tax=Ruminococcus lactaris RepID=B5CPT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD24552.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_130_000M1_scaffold_1041_12
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11446..11796)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Anaerococcus obesiensis RepID=UPI0002F769EF
Uncharacterized protein {ECO:0000313|EMBL:EEU12928.1}; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus vaginalis ATCC 51170.;"
Displaying 12 items

View Taxonomy