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L3_130_000M1_scaffold_493

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000M1_scaffold_493_1
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(251..1543)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PTK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK47436.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
transcriptional regulator
L3_130_000M1_scaffold_493_2
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1628..2947)
DNA (1320bp) protein (440aa)
ATPase related to the helicase subunit of the Holliday junction resolvase n=2 Tax=Clostridiales RepID=R5TEV7_9FIRM
ATPase related to the helicase subunit of the Holliday junction resolvase {ECO:0000313|EMBL:CCZ64213.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
ATPase related to the helicase subunit of the Holliday junction resolvase
L3_130_000M1_scaffold_493_3
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3274..4413)
DNA (1140bp) protein (380aa)
Cysteine desulfurase family protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2R1D0_9FIRM
Cysteine desulfurase family protein {ECO:0000313|EMBL:ERK47438.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
cysteine desulfurase family protein
L3_130_000M1_scaffold_493_4
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4523..5860)
DNA (1338bp) protein (446aa)
Putative permease n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PUK8_9FIRM
Uracil-xanthine permease {ECO:0000313|EMBL:CCZ64211.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
uracil-xanthine permease
L3_130_000M1_scaffold_493_5
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6097..7449)
DNA (1353bp) protein (451aa)
Uracil-xanthine permease n=1 Tax=Roseburia sp. CAG:50 RepID=R5TZ03_9FIRM
Uracil-xanthine permease {ECO:0000313|EMBL:CCZ64211.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
uracil-xanthine permease
L3_130_000M1_scaffold_493_6
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7487..7951)
DNA (465bp) protein (155aa)
4Fe-4S binding domain n=1 Tax=Blautia sp. CAG:257 RepID=R5XKB9_9FIRM
4Fe-4S binding domain {ECO:0000313|EMBL:CDA04937.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
4Fe-4S binding domain.
L3_130_000M1_scaffold_493_7
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7954..10608)
DNA (2655bp) protein (885aa)
mop; aldehyde oxidoreductase (EC:1.2.99.7)
Aldehyde oxidoreductase n=1 Tax=Blautia sp. CAG:257 RepID=R5X993_9FIRM
Aldehyde oxidoreductase {ECO:0000313|EMBL:CDA04936.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
L3_130_000M1_scaffold_493_8
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10913..11527)
DNA (615bp) protein (205aa)
Transcriptional regulator TetR family n=1 Tax=Roseburia sp. CAG:50 RepID=R5TEX8_9FIRM
Transcriptional regulator TetR family {ECO:0000313|EMBL:CCZ64210.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
TetR family transcriptional regulator
L3_130_000M1_scaffold_493_9
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11660..12037)
DNA (378bp) protein (126aa)
Putative endoribonuclease L-PSP n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2R9S0_9FIRM
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:ERK47442.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_130_000M1_scaffold_493_10
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12229..13602)
DNA (1374bp) protein (458aa)
D-phenylhydantoinase domain protein n=2 Tax=Clostridiales RepID=U2R1E4_9FIRM
D-phenylhydantoinase domain protein {ECO:0000313|EMBL:ERK47443.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_130_000M1_scaffold_493_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13679..16669)
DNA (2991bp) protein (997aa)
Selenate reductase YgfK subunit n=1 Tax=Clostridium sp. CAG:7 RepID=R5IUP6_9CLOT
Selenate reductase YgfK subunit {ECO:0000313|EMBL:CCY44034.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
selenate reductase YgfK
L3_130_000M1_scaffold_493_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16822..18153)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9V3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77814.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
putative selenium metabolism protein SsnA
L3_130_000M1_scaffold_493_13
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18469..19119
DNA (651bp) protein (217aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RRT2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ50756.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
YheO domain-containing protein
L3_130_000M1_scaffold_493_14
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19132..20346
DNA (1215bp) protein (405aa)
Diaminopropionate ammonia-lyase n=2 Tax=Lachnospiraceae RepID=F7JQH8_9FIRM
Diaminopropionate ammonia-lyase {ECO:0000313|EMBL:EGN35490.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
diaminopropionate ammonia-lyase
L3_130_000M1_scaffold_493_15
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20425..21735
DNA (1311bp) protein (437aa)
M20/DapE family protein YgeY n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JQH9_9FIRM
M20/DapE family protein YgeY {ECO:0000313|EMBL:EGN35491.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
M20/DapE family protein YgeY/putative selenium metabolism hydrolase
L3_130_000M1_scaffold_493_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21862..23055
DNA (1194bp) protein (398aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IIH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58605.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
carbamoyltransferase YgeW
L3_130_000M1_scaffold_493_17
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23173..24117
DNA (945bp) protein (315aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Desulfosporosinus sp. OT RepID=G2FLH7_9FIRM
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
L3_130_000M1_scaffold_493_18
unknown

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comp(24000..24365)
DNA (366bp) protein (122aa)

This feature has no annotations

L3_130_000M1_scaffold_493_19
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24523..25149
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:782 RepID=R5JWC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY53147.1}; TaxID=1262863 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:782.;"
hypothetical protein
Displaying 19 items

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