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L3_130_000M1_scaffold_502

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000M1_scaffold_502_1
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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220..1617
DNA (1398bp) protein (466aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2NZR8_9FIRM
L3_130_000M1_scaffold_502_2
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1631..2539
DNA (909bp) protein (303aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PIS1_9FIRM
L3_130_000M1_scaffold_502_3
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2634..3509
DNA (876bp) protein (292aa)
UPF0042 nucleotide-binding protein BN683_01128 n=2 Tax=Clostridiales RepID=R5TEH0_9FIRM
Nucleotide-binding protein BN683_01128 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Predicted P-loop-containing kinase
L3_130_000M1_scaffold_502_4
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3523..4488
DNA (966bp) protein (322aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QY33_9FIRM
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_130_000M1_scaffold_502_5
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4491..5384
DNA (894bp) protein (298aa)
Predicted kinase related to diacylglycerol kinase n=2 Tax=Clostridiales RepID=R5TL60_9FIRM
Predicted kinase related to diacylglycerol kinase {ECO:0000313|EMBL:CCZ64049.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
BmrU; putative diacylglycerol kinase
L3_130_000M1_scaffold_502_6
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5541..6404
DNA (864bp) protein (288aa)
fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2NZR4_9FIRM
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:ERK43645.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_130_000M1_scaffold_502_7
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6773..8887
DNA (2115bp) protein (705aa)
Uncharacterized protein related to glutamine synthetase (EC:6.3.1.2)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TYP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64051.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L3_130_000M1_scaffold_502_8
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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comp(8966..10009)
DNA (1044bp) protein (348aa)
Acyltransferase family n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5YDM3_9FIRM
Acyltransferase family {ECO:0000313|EMBL:CDA14647.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
Acyltransferase family.
L3_130_000M1_scaffold_502_9
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10009..10842)
DNA (834bp) protein (278aa)
S1 RNA binding domain protein n=2 Tax=Clostridiales RepID=R5U4N6_9FIRM
S1 RNA binding domain protein {ECO:0000313|EMBL:CCZ64052.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_130_000M1_scaffold_502_10
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10986..11690)
DNA (705bp) protein (235aa)
Acyl-ACP thioesterase (EC:3.1.2.14)
Acyl-ACP thioesterase n=2 Tax=Clostridiales RepID=R5TEH3_9FIRM
Acyl-ACP thioesterase {ECO:0000313|EMBL:CCZ64053.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L3_130_000M1_scaffold_502_11
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12078..12719)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TL64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64054.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_130_000M1_scaffold_502_12
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13007..15574
DNA (2568bp) protein (856aa)
Penicillin-binding protein, 1A family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PIR3_9FIRM
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ERK43639.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
glycosyltransferase family b-glycosyltransferase/PBP transpeptidase
L3_130_000M1_scaffold_502_13
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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15815..16798
DNA (984bp) protein (328aa)
NLP/P60 family protein n=2 Tax=Clostridiales RepID=R5TYP7_9FIRM
NLP/P60 family protein {ECO:0000313|EMBL:CCZ64056.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
NLP/P60 family protein
L3_130_000M1_scaffold_502_14
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17137..17823
DNA (687bp) protein (229aa)
Teichoic acid biosynthesis proteins (EC:2.4.1.187)
Glycosyltransferase, WecB/TagA/CpsF family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QY24_9FIRM
Glycosyltransferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:ERK43637.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_130_000M1_scaffold_502_15
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17942..18820
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PHJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK43636.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_130_000M1_scaffold_502_16
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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18985..20067
DNA (1083bp) protein (361aa)
Transcriptional regulator CdaR family n=1 Tax=Roseburia sp. CAG:50 RepID=R5TL68_9FIRM
Transcriptional regulator CdaR family {ECO:0000313|EMBL:CCZ64059.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
transcriptional regulator, CdaR family
L3_130_000M1_scaffold_502_17
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20212..20898
DNA (687bp) protein (229aa)
Cell division ATP-binding protein FtsE n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QQP2_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:ERK43633.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_130_000M1_scaffold_502_18
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20951..21796
DNA (846bp) protein (282aa)
Cell division protein FtsX n=2 Tax=Clostridiales RepID=U2QY19_9FIRM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
FtsX; cell division protein
L3_130_000M1_scaffold_502_19
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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22006..23280
DNA (1275bp) protein (425aa)
C-terminal peptidase (prc) (EC:3.4.21.102)
Carboxyl-terminal protease n=1 Tax=Roseburia sp. CAG:50 RepID=R5TEH7_9FIRM
Carboxyl-terminal protease {ECO:0000313|EMBL:CCZ64063.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L3_130_000M1_scaffold_502_20
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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23411..25249
DNA (1839bp) protein (613aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Roseburia sp. CAG:50 RepID=R5TL72_9FIRM
Displaying 20 items

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