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L3_130_000M1_scaffold_628

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000M1_scaffold_628_1
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(122..1204)
DNA (1083bp) protein (361aa)
CbiG protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PE46_9FIRM
CbiG protein {ECO:0000313|EMBL:ERK42396.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Cobalamin biosynthesis protein CbiG
L3_130_000M1_scaffold_628_2
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1201..1971)
DNA (771bp) protein (257aa)
precorrin-4 C11-methyltransferase (EC:2.1.1.133)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TG23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64610.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L3_130_000M1_scaffold_628_3
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2100..3323)
DNA (1224bp) protein (408aa)
Cobalt-precorrin-5B C(1)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00787}; EC=2.1.1.195 {ECO:0000256|HAMAP-Rule:MF_00787};; Cobalt-precorrin-6A synthase {ECO:0000256|HAMAP-Rule:MF_00787}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Cobalamin biosynthesis protein CbiD n=1 Tax=Eubacterium ramulus ATCC 29099 PF95_9FIRM">RepID=U2PF95_9FIRM
cobalamin biosynthesis protein CbiD
L3_130_000M1_scaffold_628_4
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3464..4387)
DNA (924bp) protein (308aa)
LysR substrate binding domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QM65_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:ERK42393.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_130_000M1_scaffold_628_5
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4412..5113)
DNA (702bp) protein (234aa)
Class II Aldolase and Adducin domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QUH6_9FIRM
Class II Aldolase and Adducin domain protein {ECO:0000313|EMBL:ERK42392.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_130_000M1_scaffold_628_6
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5176..6858)
DNA (1683bp) protein (561aa)
precorrin-2 C20-methyltransferase/cobalt-factor II C20-methyltransferase (EC:2.1.1.130 2.1.1.151)
Precorrin-2 C20-methyltransferase n=2 Tax=Clostridiales RepID=R5U6E2_9FIRM
Precorrin-2 C(20)-methyltransferase {ECO:0000313|EMBL:ERK42388.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_130_000M1_scaffold_628_7
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6865..8388)
DNA (1524bp) protein (508aa)
2Fe-2S iron-sulfur cluster binding domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QUH0_9FIRM
2Fe-2S iron-sulfur cluster binding domain protein {ECO:0000313|EMBL:ERK42387.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_130_000M1_scaffold_628_8
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8732..10195
DNA (1464bp) protein (488aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Nicotinate phosphoribosyltransferase n=2 Tax=Clostridiales RepID=R5TG35_9FIRM
hypothetical protein
L3_130_000M1_scaffold_628_9
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10306..11322)
DNA (1017bp) protein (339aa)
Glycosyltransferases involved in cell wall biogenesis n=2 Tax=Clostridiales RepID=R5U4S1_9FIRM
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CCZ66126.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Glycosyltransferases involved in cell wall biogenesis
L3_130_000M1_scaffold_628_10
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11672..12760)
DNA (1089bp) protein (363aa)
A/G-specific adenine glycosylase n=1 Tax=Roseburia sp. CAG:50 RepID=R5TFK3_9FIRM
A/G-specific adenine glycosylase {ECO:0000313|EMBL:CCZ64445.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
MutY; A/G-specific DNA glycosylase
L3_130_000M1_scaffold_628_11
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13055..13834
DNA (780bp) protein (260aa)
3-hydroxybutyryl-CoA dehydratase n=2 Tax=Clostridiales RepID=U2PE26_9FIRM
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:ERK42376.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_130_000M1_scaffold_628_12
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14083..14892
DNA (810bp) protein (270aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U5V9_9FIRM
L3_130_000M1_scaffold_628_13
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15130..15981)
DNA (852bp) protein (284aa)
Chalcone isomerase {ECO:0000313|EMBL:AGS82960.1}; EC=5.5.1.6 {ECO:0000313|EMBL:AGS82960.1};; TaxID=39490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus.;"
Acetyl-CoA hydrolase n=2 Tax=Clostridiales RepID=R5TGG0_9FIRM
ACH1; acetyl-CoA hydrolase
L3_130_000M1_scaffold_628_14
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16176..17153)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TN51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64769.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_130_000M1_scaffold_628_15
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17508..18428)
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TGF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64768.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
SufBD protein
L3_130_000M1_scaffold_628_16
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18648..19379)
DNA (732bp) protein (244aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5U6U5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64767.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
ABC-type transport system involved in Fe-S cluster assembly, ATPase component
L3_130_000M1_scaffold_628_17
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19718..19906)
DNA (189bp) protein (63aa)
Phage shock protein C PspC n=2 Tax=Clostridiales RepID=R5U0V2_9FIRM
Phage shock protein C PspC {ECO:0000313|EMBL:CCZ64766.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
phage shock protein C, PspC
L3_130_000M1_scaffold_628_18
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20060..20683)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TGF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64765.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
Displaying 18 items

View Taxonomy