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L3_130_000M1_scaffold_768

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000M1_scaffold_768_1
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(157..957)
DNA (801bp) protein (267aa)
Glycogen debranching enzyme n=1 Tax=Roseburia sp. CAG:50 RepID=R5TZG5_9FIRM
Glycogen debranching enzyme {ECO:0000313|EMBL:CCZ64361.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
GDB1; glycogen debranching protein
L3_130_000M1_scaffold_768_2
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1168..1878
DNA (711bp) protein (237aa)
Response regulator receiver domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PJP7_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:ERK43954.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L3_130_000M1_scaffold_768_3
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1862..3319
DNA (1458bp) protein (486aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Histidine kinase A domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2P0N7_9FIRM
integral membrane sensor signal transduction histidine kinase
L3_130_000M1_scaffold_768_4
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3477..6089)
DNA (2613bp) protein (871aa)
Protein translocase subunit SecA n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PIJ5_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_130_000M1_scaffold_768_5
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6242..6499
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TK96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ63764.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_130_000M1_scaffold_768_6
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7580..8437
DNA (858bp) protein (286aa)
EDD domain protein, DegV family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PDU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ63765.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_130_000M1_scaffold_768_7
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8689..9003)
DNA (315bp) protein (105aa)
UPF0145 protein BN683_00875 n=1 Tax=Roseburia sp. CAG:50 RepID=R5TXN9_9FIRM
UPF0145 protein BN683_00875 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_130_000M1_scaffold_768_8
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9182..10039)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U3T7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ63767.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_130_000M1_scaffold_768_9
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10033..10731)
DNA (699bp) protein (233aa)
ABC-type multidrug transport system ATPase component n=1 Tax=Roseburia sp. CAG:50 RepID=R5TDP4_9FIRM
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CCZ63768.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
CcmA; multidrug ABC transporter ATPase
L3_130_000M1_scaffold_768_10
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10721..11098)
DNA (378bp) protein (126aa)
Transcriptional regulator, GntR family n=2 Tax=Clostridiales RepID=U2NUZ2_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ERK41860.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_130_000M1_scaffold_768_11
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11754..12698
DNA (945bp) protein (315aa)
Trigger factor n=1 Tax=Roseburia sp. CAG:50 RepID=R5TDP2_9FIRM
Trigger factor {ECO:0000313|EMBL:CCZ63770.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
trigger factor
L3_130_000M1_scaffold_768_12
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13063..13341
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2QSY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ63771.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_130_000M1_scaffold_768_13
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13686..15050)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5U3U2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ63772.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
putative efflux protein, MATE family
L3_130_000M1_scaffold_768_14
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15047..15901)
DNA (855bp) protein (285aa)
glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Roseburia sp. CAG:50 RepID=R5TDP9_9FIRM
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CCZ63773.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L3_130_000M1_scaffold_768_15
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16086..16562)
DNA (477bp) protein (159aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TKA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ63774.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
Displaying 15 items

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