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L3_130_000M1_scaffold_822

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000M1_scaffold_822_1
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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125..901
DNA (777bp) protein (259aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Thiazole synthase n=1 Tax=Roseburia sp. CAG:50 RepID=R5THY8_9FIRM
thiazole-phosphate synthase
L3_130_000M1_scaffold_822_2
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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915..2129
DNA (1215bp) protein (405aa)
Thiazole biosynthesis protein ThiH n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PH63_9FIRM
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:ERK49885.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
tyrosine lyase ThiH
L3_130_000M1_scaffold_822_3
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2259..2888
DNA (630bp) protein (210aa)
Thiamine monophosphate synthase (EC:2.5.1.3)
Putative thiamine-phosphate diphosphorylase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q0K4_9FIRM
Thiamine monophosphate synthase {ECO:0000313|EMBL:CCZ65288.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L3_130_000M1_scaffold_822_4
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2917..3879)
DNA (963bp) protein (321aa)
CAAX amino terminal protease family protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RGP0_9FIRM
CAAX amino terminal protease family protein {ECO:0000313|EMBL:ERK49887.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
metal-dependent membrane protease
L3_130_000M1_scaffold_822_5
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4223..5164
DNA (942bp) protein (314aa)
membrane dipeptidase (EC:3.4.13.19)
Renal dipeptidase family protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2R8D9_9FIRM
Renal dipeptidase family protein {ECO:0000313|EMBL:ERK49888.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_130_000M1_scaffold_822_6
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5363..5896
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:389 RepID=R7LPA2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE90400.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
hypothetical protein
L3_130_000M1_scaffold_822_7
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6030..6635)
DNA (606bp) protein (202aa)
RNA polymerase factor sigma-70 n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q1L1_9FIRM
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:ERK49889.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
RNA polymerase, sigma 30 subunit, SigH
L3_130_000M1_scaffold_822_8
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6653..7399)
DNA (747bp) protein (249aa)
rRNA methylase, putative, group 3 (EC:2.1.1.-)
RNA methyltransferase TrmH family group 3 n=2 Tax=Clostridiales RepID=R5TPJ2_9FIRM
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:ERK49890.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_130_000M1_scaffold_822_9
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7531..8004)
DNA (474bp) protein (158aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Mini-ribonuclease 3 n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q0K9_9FIRM
putative ribonuclease III
L3_130_000M1_scaffold_822_10
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7989..9428)
DNA (1440bp) protein (480aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Cysteine--tRNA ligase n=2 Tax=Clostridiales RepID=R5U8E1_9FIRM
hypothetical protein
L3_130_000M1_scaffold_822_11
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9439..10530)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U2C7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65281.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_130_000M1_scaffold_822_12
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10548..11618)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YKJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD64851.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L3_130_000M1_scaffold_822_13
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11621..12157)
DNA (537bp) protein (179aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=2 Tax=Clostridiales RepID=U2Q1L7_9FIRM
L3_130_000M1_scaffold_822_14
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12408..13973
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PH74_9FIRM
Uncharacterized membrane protein {ECO:0000313|EMBL:CCZ65551.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
membrane protein
L3_130_000M1_scaffold_822_15
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14311..15033)
DNA (723bp) protein (241aa)
Acetylglutamate kinase (EC:2.7.2.8)
Amino acid kinase family n=2 Tax=Clostridiales RepID=R5U9B9_9FIRM
Amino acid kinase family {ECO:0000313|EMBL:CCZ65552.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Displaying 15 items

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