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L3_130_000M1_scaffold_835

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000M1_scaffold_835_1
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(165..1658)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U1X9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65141.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_130_000M1_scaffold_835_2
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1719..2459)
DNA (741bp) protein (247aa)
RNA polymerase sigma factor n=2 Tax=Clostridiales RepID=R5THK2_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
L3_130_000M1_scaffold_835_3
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2636..3358)
DNA (723bp) protein (241aa)
Putative sigma-E processing peptidase SpoIIGA n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2NXW0_9FIRM
Putative sigma-E processing peptidase SpoIIGA {ECO:0000313|EMBL:ERK42920.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_130_000M1_scaffold_835_4
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3498..4664)
DNA (1167bp) protein (389aa)
Cell division protein FtsZ n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PFI0_9FIRM
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
cell division protein FtsZ
L3_130_000M1_scaffold_835_5
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4914..5729)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5THH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65138.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Cell division septal protein
L3_130_000M1_scaffold_835_6
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5880..7019)
DNA (1140bp) protein (380aa)
Bacterial cell division membrane protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U806_9FIRM
Bacterial cell division membrane protein {ECO:0000313|EMBL:CCZ65137.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
cell division membrane protein
L3_130_000M1_scaffold_835_7
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7026..8387)
DNA (1362bp) protein (454aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PGQ3_9FIRM
hypothetical protein
L3_130_000M1_scaffold_835_8
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8433..9383)
DNA (951bp) protein (317aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2NXW5_9FIRM
L3_130_000M1_scaffold_835_9
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9500..11257)
DNA (1758bp) protein (586aa)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PFI4_9FIRM
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:ERK42926.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Cell division protein FtsI/penicillin-binding protein 2
L3_130_000M1_scaffold_835_10
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11386..13482)
DNA (2097bp) protein (699aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5THG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65133.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_130_000M1_scaffold_835_11
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13495..13986)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QNP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK42928.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_130_000M1_scaffold_835_12
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14016..14954)
DNA (939bp) protein (313aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PGR0_9FIRM
Displaying 12 items

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